Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh17Q9R100 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh17Q9R100 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh17Q9R100 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh17Q9R100 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh17Q9R100 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh17Q9R100 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh17Q9R100 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh17Q9R100 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.62■■□□□ 1.05
Cdh17Q9R100 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh17Q9R100 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cdh17Q9R100 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh17Q9R100 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Cdh17Q9R100 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Cdh17Q9R100 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh17Q9R100 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.58■■□□□ 1.05
Cdh17Q9R100 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh17Q9R100 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh17Q9R100 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh17Q9R100 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdh17Q9R100 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdh17Q9R100 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh17Q9R100 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh17Q9R100 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Cdh17Q9R100 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh17Q9R100 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh17Q9R100 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh17Q9R100 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.56■■□□□ 1.04
Cdh17Q9R100 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cdh17Q9R100 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.55■■□□□ 1.04
Cdh17Q9R100 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
Cdh17Q9R100 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh17Q9R100 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh17Q9R100 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh17Q9R100 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.55■■□□□ 1.04
Cdh17Q9R100 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh17Q9R100 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh17Q9R100 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh17Q9R100 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.55■■□□□ 1.04
Cdh17Q9R100 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cdh17Q9R100 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh17Q9R100 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh17Q9R100 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cdh17Q9R100 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cdh17Q9R100 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh17Q9R100 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh17Q9R100 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh17Q9R100 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh17Q9R100 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh17Q9R100 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh17Q9R100 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.53■■□□□ 1.04
Cdh17Q9R100 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh17Q9R100 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cdh17Q9R100 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh17Q9R100 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.52■■□□□ 1.04
Cdh17Q9R100 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh17Q9R100 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh17Q9R100 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh17Q9R100 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh17Q9R100 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.51■■□□□ 1.03
Cdh17Q9R100 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cdh17Q9R100 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdh17Q9R100 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdh17Q9R100 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdh17Q9R100 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.5■■□□□ 1.03
Cdh17Q9R100 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdh17Q9R100 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.49■■□□□ 1.03
Cdh17Q9R100 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdh17Q9R100 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdh17Q9R100 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdh17Q9R100 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdh17Q9R100 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdh17Q9R100 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdh17Q9R100 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Cdh17Q9R100 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cdh17Q9R100 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdh17Q9R100 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdh17Q9R100 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdh17Q9R100 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdh17Q9R100 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdh17Q9R100 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdh17Q9R100 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdh17Q9R100 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdh17Q9R100 Gm22567-201ENSMUST00000175542 342 ntBASIC21.46■■□□□ 1.03
Cdh17Q9R100 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.46■■□□□ 1.03
Cdh17Q9R100 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Cdh17Q9R100 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.46■■□□□ 1.03
Cdh17Q9R100 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdh17Q9R100 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.45■■□□□ 1.02
Cdh17Q9R100 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdh17Q9R100 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.45■■□□□ 1.02
Cdh17Q9R100 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cdh17Q9R100 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cdh17Q9R100 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Cdh17Q9R100 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdh17Q9R100 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdh17Q9R100 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.44■■□□□ 1.02
Cdh17Q9R100 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cdh17Q9R100 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cdh17Q9R100 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms