Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4bQ9ES00 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4bQ9ES00 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube4bQ9ES00 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ube4bQ9ES00 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.18■□□□□ 0.98
Ube4bQ9ES00 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.18■□□□□ 0.98
Ube4bQ9ES00 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ube4bQ9ES00 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4bQ9ES00 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4bQ9ES00 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ube4bQ9ES00 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4bQ9ES00 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4bQ9ES00 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4bQ9ES00 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4bQ9ES00 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.16■□□□□ 0.98
Ube4bQ9ES00 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4bQ9ES00 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ube4bQ9ES00 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.15■□□□□ 0.98
Ube4bQ9ES00 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube4bQ9ES00 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube4bQ9ES00 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ube4bQ9ES00 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ube4bQ9ES00 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.13■□□□□ 0.97
Ube4bQ9ES00 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.13■□□□□ 0.97
Ube4bQ9ES00 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ube4bQ9ES00 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ube4bQ9ES00 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ube4bQ9ES00 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ube4bQ9ES00 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ube4bQ9ES00 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4bQ9ES00 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.12■□□□□ 0.97
Ube4bQ9ES00 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4bQ9ES00 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ube4bQ9ES00 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4bQ9ES00 Particl-201ENSMUST00000205370 1560 ntBASIC21.11■□□□□ 0.97
Ube4bQ9ES00 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4bQ9ES00 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.11■□□□□ 0.97
Ube4bQ9ES00 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ube4bQ9ES00 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4bQ9ES00 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.11■□□□□ 0.97
Ube4bQ9ES00 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4bQ9ES00 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4bQ9ES00 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4bQ9ES00 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4bQ9ES00 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4bQ9ES00 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4bQ9ES00 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4bQ9ES00 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ube4bQ9ES00 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4bQ9ES00 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4bQ9ES00 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4bQ9ES00 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4bQ9ES00 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ube4bQ9ES00 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ube4bQ9ES00 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ube4bQ9ES00 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ube4bQ9ES00 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ube4bQ9ES00 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ube4bQ9ES00 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4bQ9ES00 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4bQ9ES00 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4bQ9ES00 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ube4bQ9ES00 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4bQ9ES00 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Ube4bQ9ES00 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ube4bQ9ES00 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4bQ9ES00 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ube4bQ9ES00 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.06■□□□□ 0.96
Ube4bQ9ES00 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ube4bQ9ES00 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.06■□□□□ 0.96
Ube4bQ9ES00 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ube4bQ9ES00 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ube4bQ9ES00 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ube4bQ9ES00 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ube4bQ9ES00 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ube4bQ9ES00 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ube4bQ9ES00 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ube4bQ9ES00 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ube4bQ9ES00 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ube4bQ9ES00 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ube4bQ9ES00 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ube4bQ9ES00 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ube4bQ9ES00 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Ube4bQ9ES00 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ube4bQ9ES00 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ube4bQ9ES00 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ube4bQ9ES00 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ube4bQ9ES00 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ube4bQ9ES00 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.02■□□□□ 0.96
Ube4bQ9ES00 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ube4bQ9ES00 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ube4bQ9ES00 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ube4bQ9ES00 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ube4bQ9ES00 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ube4bQ9ES00 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ube4bQ9ES00 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ube4bQ9ES00 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ube4bQ9ES00 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ube4bQ9ES00 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ube4bQ9ES00 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms