Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssmem1Q9D9Y8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssmem1Q9D9Y8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssmem1Q9D9Y8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssmem1Q9D9Y8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.09■□□□□ 0.65
Ssmem1Q9D9Y8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ssmem1Q9D9Y8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ssmem1Q9D9Y8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssmem1Q9D9Y8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ssmem1Q9D9Y8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ssmem1Q9D9Y8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssmem1Q9D9Y8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssmem1Q9D9Y8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ssmem1Q9D9Y8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssmem1Q9D9Y8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssmem1Q9D9Y8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.06■□□□□ 0.64
Ssmem1Q9D9Y8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ssmem1Q9D9Y8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssmem1Q9D9Y8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ssmem1Q9D9Y8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssmem1Q9D9Y8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssmem1Q9D9Y8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ssmem1Q9D9Y8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ssmem1Q9D9Y8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ssmem1Q9D9Y8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ssmem1Q9D9Y8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssmem1Q9D9Y8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssmem1Q9D9Y8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssmem1Q9D9Y8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.04■□□□□ 0.64
Ssmem1Q9D9Y8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.04■□□□□ 0.64
Ssmem1Q9D9Y8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ssmem1Q9D9Y8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssmem1Q9D9Y8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssmem1Q9D9Y8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Ssmem1Q9D9Y8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssmem1Q9D9Y8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssmem1Q9D9Y8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssmem1Q9D9Y8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssmem1Q9D9Y8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssmem1Q9D9Y8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ssmem1Q9D9Y8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ssmem1Q9D9Y8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssmem1Q9D9Y8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssmem1Q9D9Y8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssmem1Q9D9Y8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ssmem1Q9D9Y8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.02■□□□□ 0.63
Ssmem1Q9D9Y8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ssmem1Q9D9Y8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ssmem1Q9D9Y8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ssmem1Q9D9Y8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ssmem1Q9D9Y8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ssmem1Q9D9Y8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ssmem1Q9D9Y8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ssmem1Q9D9Y8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssmem1Q9D9Y8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ssmem1Q9D9Y8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssmem1Q9D9Y8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssmem1Q9D9Y8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssmem1Q9D9Y8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ssmem1Q9D9Y8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssmem1Q9D9Y8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ssmem1Q9D9Y8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ssmem1Q9D9Y8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssmem1Q9D9Y8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssmem1Q9D9Y8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssmem1Q9D9Y8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ssmem1Q9D9Y8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.99■□□□□ 0.63
Ssmem1Q9D9Y8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssmem1Q9D9Y8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ssmem1Q9D9Y8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ssmem1Q9D9Y8 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.98■□□□□ 0.63
Ssmem1Q9D9Y8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ssmem1Q9D9Y8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssmem1Q9D9Y8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssmem1Q9D9Y8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ssmem1Q9D9Y8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssmem1Q9D9Y8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssmem1Q9D9Y8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ssmem1Q9D9Y8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssmem1Q9D9Y8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.97■□□□□ 0.63
Ssmem1Q9D9Y8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ssmem1Q9D9Y8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssmem1Q9D9Y8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssmem1Q9D9Y8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssmem1Q9D9Y8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ssmem1Q9D9Y8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ssmem1Q9D9Y8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.96■□□□□ 0.63
Ssmem1Q9D9Y8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ssmem1Q9D9Y8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssmem1Q9D9Y8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ssmem1Q9D9Y8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ssmem1Q9D9Y8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssmem1Q9D9Y8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssmem1Q9D9Y8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssmem1Q9D9Y8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ssmem1Q9D9Y8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.95■□□□□ 0.62
Ssmem1Q9D9Y8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ssmem1Q9D9Y8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssmem1Q9D9Y8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.94■□□□□ 0.62
Ssmem1Q9D9Y8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms