Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.49■□□□□ 0.71
Ndufa11Q9D8B4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndufa11Q9D8B4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndufa11Q9D8B4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ndufa11Q9D8B4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndufa11Q9D8B4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.47■□□□□ 0.71
Ndufa11Q9D8B4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.47■□□□□ 0.71
Ndufa11Q9D8B4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndufa11Q9D8B4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ndufa11Q9D8B4 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.46■□□□□ 0.71
Ndufa11Q9D8B4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ndufa11Q9D8B4 Gm7417-201ENSMUST00000192950 473 ntBASIC19.46■□□□□ 0.71
Ndufa11Q9D8B4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndufa11Q9D8B4 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.46■□□□□ 0.71
Ndufa11Q9D8B4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndufa11Q9D8B4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndufa11Q9D8B4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndufa11Q9D8B4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndufa11Q9D8B4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndufa11Q9D8B4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndufa11Q9D8B4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.44■□□□□ 0.7
Ndufa11Q9D8B4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.44■□□□□ 0.7
Ndufa11Q9D8B4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndufa11Q9D8B4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndufa11Q9D8B4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ndufa11Q9D8B4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndufa11Q9D8B4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ndufa11Q9D8B4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.43■□□□□ 0.7
Ndufa11Q9D8B4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndufa11Q9D8B4 Gm13241-201ENSMUST00000094493 780 ntBASIC19.43■□□□□ 0.7
Ndufa11Q9D8B4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndufa11Q9D8B4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndufa11Q9D8B4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.43■□□□□ 0.7
Ndufa11Q9D8B4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndufa11Q9D8B4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndufa11Q9D8B4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndufa11Q9D8B4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndufa11Q9D8B4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.42■□□□□ 0.7
Ndufa11Q9D8B4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.42■□□□□ 0.7
Ndufa11Q9D8B4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndufa11Q9D8B4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndufa11Q9D8B4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ndufa11Q9D8B4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ndufa11Q9D8B4 Amer2-203ENSMUST00000225247 2662 ntBASIC19.41■□□□□ 0.7
Ndufa11Q9D8B4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndufa11Q9D8B4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndufa11Q9D8B4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ndufa11Q9D8B4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.4■□□□□ 0.7
Ndufa11Q9D8B4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ndufa11Q9D8B4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndufa11Q9D8B4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndufa11Q9D8B4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ndufa11Q9D8B4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ndufa11Q9D8B4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.38■□□□□ 0.69
Ndufa11Q9D8B4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ndufa11Q9D8B4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.38■□□□□ 0.69
Ndufa11Q9D8B4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.38■□□□□ 0.69
Ndufa11Q9D8B4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ndufa11Q9D8B4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ndufa11Q9D8B4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ndufa11Q9D8B4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ndufa11Q9D8B4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ndufa11Q9D8B4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ndufa11Q9D8B4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.37■□□□□ 0.69
Ndufa11Q9D8B4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.37■□□□□ 0.69
Ndufa11Q9D8B4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.37■□□□□ 0.69
Ndufa11Q9D8B4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ndufa11Q9D8B4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ndufa11Q9D8B4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ndufa11Q9D8B4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Ndufa11Q9D8B4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ndufa11Q9D8B4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.36■□□□□ 0.69
Ndufa11Q9D8B4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ndufa11Q9D8B4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Ndufa11Q9D8B4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ndufa11Q9D8B4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ndufa11Q9D8B4 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.34■□□□□ 0.69
Ndufa11Q9D8B4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ndufa11Q9D8B4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ndufa11Q9D8B4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ndufa11Q9D8B4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ndufa11Q9D8B4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ndufa11Q9D8B4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ndufa11Q9D8B4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ndufa11Q9D8B4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.32■□□□□ 0.68
Ndufa11Q9D8B4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ndufa11Q9D8B4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.31■□□□□ 0.68
Ndufa11Q9D8B4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ndufa11Q9D8B4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.31■□□□□ 0.68
Ndufa11Q9D8B4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.31■□□□□ 0.68
Ndufa11Q9D8B4 Gm9847-201ENSMUST00000052528 599 ntBASIC19.31■□□□□ 0.68
Ndufa11Q9D8B4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ndufa11Q9D8B4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ndufa11Q9D8B4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufa11Q9D8B4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufa11Q9D8B4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufa11Q9D8B4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.3■□□□□ 0.68
Ndufa11Q9D8B4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufa11Q9D8B4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufa11Q9D8B4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms