Protein–RNA interactions for Protein: Q9D7V2

Lysmd2, LysM and putative peptidoglycan-binding domain-containing protein 2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd2Q9D7V2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lysmd2Q9D7V2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lysmd2Q9D7V2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd2Q9D7V2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd2Q9D7V2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Lysmd2Q9D7V2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd2Q9D7V2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lysmd2Q9D7V2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd2Q9D7V2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd2Q9D7V2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd2Q9D7V2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Lysmd2Q9D7V2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd2Q9D7V2 Notumos-201ENSMUST00000151998 2659 ntBASIC18.27■□□□□ 0.52
Lysmd2Q9D7V2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lysmd2Q9D7V2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd2Q9D7V2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd2Q9D7V2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd2Q9D7V2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Lysmd2Q9D7V2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd2Q9D7V2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lysmd2Q9D7V2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd2Q9D7V2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.25■□□□□ 0.51
Lysmd2Q9D7V2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd2Q9D7V2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd2Q9D7V2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd2Q9D7V2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd2Q9D7V2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Lysmd2Q9D7V2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Lysmd2Q9D7V2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd2Q9D7V2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd2Q9D7V2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd2Q9D7V2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd2Q9D7V2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lysmd2Q9D7V2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd2Q9D7V2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd2Q9D7V2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lysmd2Q9D7V2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd2Q9D7V2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd2Q9D7V2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd2Q9D7V2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lysmd2Q9D7V2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd2Q9D7V2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd2Q9D7V2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd2Q9D7V2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd2Q9D7V2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd2Q9D7V2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd2Q9D7V2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd2Q9D7V2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lysmd2Q9D7V2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.19■□□□□ 0.5
Lysmd2Q9D7V2 Gm37136-201ENSMUST00000194368 194 ntBASIC18.19■□□□□ 0.5
Lysmd2Q9D7V2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd2Q9D7V2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd2Q9D7V2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd2Q9D7V2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd2Q9D7V2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd2Q9D7V2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd2Q9D7V2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.17■□□□□ 0.5
Lysmd2Q9D7V2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd2Q9D7V2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd2Q9D7V2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd2Q9D7V2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd2Q9D7V2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
Lysmd2Q9D7V2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Lysmd2Q9D7V2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd2Q9D7V2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd2Q9D7V2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd2Q9D7V2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lysmd2Q9D7V2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd2Q9D7V2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd2Q9D7V2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd2Q9D7V2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd2Q9D7V2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd2Q9D7V2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lysmd2Q9D7V2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd2Q9D7V2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd2Q9D7V2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd2Q9D7V2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lysmd2Q9D7V2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.14■□□□□ 0.49
Lysmd2Q9D7V2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd2Q9D7V2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd2Q9D7V2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd2Q9D7V2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd2Q9D7V2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd2Q9D7V2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Lysmd2Q9D7V2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd2Q9D7V2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Lysmd2Q9D7V2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd2Q9D7V2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd2Q9D7V2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd2Q9D7V2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms