Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RtcAQ9D7H3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RtcAQ9D7H3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RtcAQ9D7H3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RtcAQ9D7H3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RtcAQ9D7H3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RtcAQ9D7H3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RtcAQ9D7H3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RtcAQ9D7H3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RtcAQ9D7H3 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.61■■□□□ 1.05
RtcAQ9D7H3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RtcAQ9D7H3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RtcAQ9D7H3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.6■■□□□ 1.05
RtcAQ9D7H3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RtcAQ9D7H3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RtcAQ9D7H3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RtcAQ9D7H3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RtcAQ9D7H3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RtcAQ9D7H3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RtcAQ9D7H3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RtcAQ9D7H3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RtcAQ9D7H3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.58■■□□□ 1.05
RtcAQ9D7H3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RtcAQ9D7H3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RtcAQ9D7H3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RtcAQ9D7H3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RtcAQ9D7H3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RtcAQ9D7H3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RtcAQ9D7H3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.56■■□□□ 1.04
RtcAQ9D7H3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RtcAQ9D7H3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.56■■□□□ 1.04
RtcAQ9D7H3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RtcAQ9D7H3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RtcAQ9D7H3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RtcAQ9D7H3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RtcAQ9D7H3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RtcAQ9D7H3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RtcAQ9D7H3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.55■■□□□ 1.04
RtcAQ9D7H3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RtcAQ9D7H3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RtcAQ9D7H3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RtcAQ9D7H3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RtcAQ9D7H3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RtcAQ9D7H3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RtcAQ9D7H3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
RtcAQ9D7H3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RtcAQ9D7H3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RtcAQ9D7H3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RtcAQ9D7H3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RtcAQ9D7H3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RtcAQ9D7H3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RtcAQ9D7H3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RtcAQ9D7H3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RtcAQ9D7H3 Gm10420-201ENSMUST00000121713 882 ntBASIC21.52■■□□□ 1.04
RtcAQ9D7H3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RtcAQ9D7H3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RtcAQ9D7H3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RtcAQ9D7H3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RtcAQ9D7H3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RtcAQ9D7H3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RtcAQ9D7H3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RtcAQ9D7H3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RtcAQ9D7H3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RtcAQ9D7H3 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.51■■□□□ 1.03
RtcAQ9D7H3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RtcAQ9D7H3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RtcAQ9D7H3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RtcAQ9D7H3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RtcAQ9D7H3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RtcAQ9D7H3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RtcAQ9D7H3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RtcAQ9D7H3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RtcAQ9D7H3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.49■■□□□ 1.03
RtcAQ9D7H3 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.49■■□□□ 1.03
RtcAQ9D7H3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RtcAQ9D7H3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RtcAQ9D7H3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RtcAQ9D7H3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.49■■□□□ 1.03
RtcAQ9D7H3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RtcAQ9D7H3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.48■■□□□ 1.03
RtcAQ9D7H3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RtcAQ9D7H3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RtcAQ9D7H3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RtcAQ9D7H3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RtcAQ9D7H3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RtcAQ9D7H3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RtcAQ9D7H3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RtcAQ9D7H3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RtcAQ9D7H3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RtcAQ9D7H3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RtcAQ9D7H3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RtcAQ9D7H3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RtcAQ9D7H3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RtcAQ9D7H3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RtcAQ9D7H3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RtcAQ9D7H3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RtcAQ9D7H3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RtcAQ9D7H3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RtcAQ9D7H3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RtcAQ9D7H3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms