Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ift27Q9D0P8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ift27Q9D0P8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ift27Q9D0P8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ift27Q9D0P8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ift27Q9D0P8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ift27Q9D0P8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ift27Q9D0P8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.2■□□□□ 0.82
Ift27Q9D0P8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ift27Q9D0P8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ift27Q9D0P8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ift27Q9D0P8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ift27Q9D0P8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ift27Q9D0P8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ift27Q9D0P8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.19■□□□□ 0.82
Ift27Q9D0P8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ift27Q9D0P8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.19■□□□□ 0.82
Ift27Q9D0P8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ift27Q9D0P8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.18■□□□□ 0.82
Ift27Q9D0P8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ift27Q9D0P8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ift27Q9D0P8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ift27Q9D0P8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ift27Q9D0P8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ift27Q9D0P8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ift27Q9D0P8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ift27Q9D0P8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ift27Q9D0P8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.15■□□□□ 0.82
Ift27Q9D0P8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ift27Q9D0P8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ift27Q9D0P8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
Ift27Q9D0P8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ift27Q9D0P8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ift27Q9D0P8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ift27Q9D0P8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.13■□□□□ 0.81
Ift27Q9D0P8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ift27Q9D0P8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ift27Q9D0P8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ift27Q9D0P8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ift27Q9D0P8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ift27Q9D0P8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.12■□□□□ 0.81
Ift27Q9D0P8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ift27Q9D0P8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ift27Q9D0P8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ift27Q9D0P8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ift27Q9D0P8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ift27Q9D0P8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.11■□□□□ 0.81
Ift27Q9D0P8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.11■□□□□ 0.81
Ift27Q9D0P8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.11■□□□□ 0.81
Ift27Q9D0P8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Ift27Q9D0P8 Gm24970-201ENSMUST00000175582 82 ntBASIC20.11■□□□□ 0.81
Ift27Q9D0P8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ift27Q9D0P8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Ift27Q9D0P8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ift27Q9D0P8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ift27Q9D0P8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Ift27Q9D0P8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift27Q9D0P8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Ift27Q9D0P8 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.09■□□□□ 0.81
Ift27Q9D0P8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
Ift27Q9D0P8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ift27Q9D0P8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.09■□□□□ 0.81
Ift27Q9D0P8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Ift27Q9D0P8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ift27Q9D0P8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ift27Q9D0P8 Zfp131-205ENSMUST00000223812 663 ntBASIC20.08■□□□□ 0.81
Ift27Q9D0P8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ift27Q9D0P8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ift27Q9D0P8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.07■□□□□ 0.8
Ift27Q9D0P8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ift27Q9D0P8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ift27Q9D0P8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Ift27Q9D0P8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift27Q9D0P8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.06■□□□□ 0.8
Ift27Q9D0P8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ift27Q9D0P8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift27Q9D0P8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift27Q9D0P8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift27Q9D0P8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ift27Q9D0P8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ift27Q9D0P8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ift27Q9D0P8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ift27Q9D0P8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ift27Q9D0P8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ift27Q9D0P8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift27Q9D0P8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ift27Q9D0P8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift27Q9D0P8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ift27Q9D0P8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ift27Q9D0P8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ift27Q9D0P8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ift27Q9D0P8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.02■□□□□ 0.8
Ift27Q9D0P8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ift27Q9D0P8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ift27Q9D0P8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ift27Q9D0P8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.01■□□□□ 0.79
Ift27Q9D0P8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ift27Q9D0P8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ift27Q9D0P8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ift27Q9D0P8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms