Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim13Q9CYB0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim13Q9CYB0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.36■□□□□ 0.85
Trim13Q9CYB0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim13Q9CYB0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim13Q9CYB0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.36■□□□□ 0.85
Trim13Q9CYB0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim13Q9CYB0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim13Q9CYB0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim13Q9CYB0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim13Q9CYB0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.35■□□□□ 0.85
Trim13Q9CYB0 Gm37136-201ENSMUST00000194368 194 ntBASIC20.35■□□□□ 0.85
Trim13Q9CYB0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim13Q9CYB0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim13Q9CYB0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Trim13Q9CYB0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim13Q9CYB0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim13Q9CYB0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim13Q9CYB0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Trim13Q9CYB0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.33■□□□□ 0.84
Trim13Q9CYB0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim13Q9CYB0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trim13Q9CYB0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim13Q9CYB0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim13Q9CYB0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim13Q9CYB0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim13Q9CYB0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim13Q9CYB0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
Trim13Q9CYB0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.3■□□□□ 0.84
Trim13Q9CYB0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim13Q9CYB0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim13Q9CYB0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim13Q9CYB0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim13Q9CYB0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim13Q9CYB0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim13Q9CYB0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trim13Q9CYB0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.29■□□□□ 0.84
Trim13Q9CYB0 Nkain2-201ENSMUST00000092602 558 ntBASIC20.29■□□□□ 0.84
Trim13Q9CYB0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim13Q9CYB0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim13Q9CYB0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim13Q9CYB0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Trim13Q9CYB0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim13Q9CYB0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim13Q9CYB0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trim13Q9CYB0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim13Q9CYB0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim13Q9CYB0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim13Q9CYB0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim13Q9CYB0 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.25■□□□□ 0.83
Trim13Q9CYB0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim13Q9CYB0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim13Q9CYB0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim13Q9CYB0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim13Q9CYB0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim13Q9CYB0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim13Q9CYB0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim13Q9CYB0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim13Q9CYB0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim13Q9CYB0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim13Q9CYB0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim13Q9CYB0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim13Q9CYB0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim13Q9CYB0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim13Q9CYB0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim13Q9CYB0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim13Q9CYB0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim13Q9CYB0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim13Q9CYB0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim13Q9CYB0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim13Q9CYB0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim13Q9CYB0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trim13Q9CYB0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Trim13Q9CYB0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim13Q9CYB0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim13Q9CYB0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim13Q9CYB0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim13Q9CYB0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim13Q9CYB0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim13Q9CYB0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim13Q9CYB0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim13Q9CYB0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim13Q9CYB0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim13Q9CYB0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim13Q9CYB0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim13Q9CYB0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim13Q9CYB0 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.18■□□□□ 0.82
Trim13Q9CYB0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim13Q9CYB0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim13Q9CYB0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim13Q9CYB0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim13Q9CYB0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim13Q9CYB0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim13Q9CYB0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim13Q9CYB0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim13Q9CYB0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim13Q9CYB0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim13Q9CYB0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.16■□□□□ 0.82
Trim13Q9CYB0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.16■□□□□ 0.82
Trim13Q9CYB0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms