Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Khdc3Q9CWU5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Khdc3Q9CWU5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Khdc3Q9CWU5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Khdc3Q9CWU5 Gm16437-201ENSMUST00000025669 507 ntBASIC21.13■□□□□ 0.97
Khdc3Q9CWU5 Gm9806-201ENSMUST00000051080 552 ntBASIC21.13■□□□□ 0.97
Khdc3Q9CWU5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Khdc3Q9CWU5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Khdc3Q9CWU5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Khdc3Q9CWU5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Khdc3Q9CWU5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Khdc3Q9CWU5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Khdc3Q9CWU5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Khdc3Q9CWU5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Khdc3Q9CWU5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Khdc3Q9CWU5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Khdc3Q9CWU5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Khdc3Q9CWU5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Khdc3Q9CWU5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Khdc3Q9CWU5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
Khdc3Q9CWU5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Khdc3Q9CWU5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Khdc3Q9CWU5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.09■□□□□ 0.97
Khdc3Q9CWU5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Khdc3Q9CWU5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Khdc3Q9CWU5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Khdc3Q9CWU5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Khdc3Q9CWU5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Khdc3Q9CWU5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Khdc3Q9CWU5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Khdc3Q9CWU5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.08■□□□□ 0.97
Khdc3Q9CWU5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Khdc3Q9CWU5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Khdc3Q9CWU5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Khdc3Q9CWU5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Khdc3Q9CWU5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Khdc3Q9CWU5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.08■□□□□ 0.96
Khdc3Q9CWU5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Khdc3Q9CWU5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Khdc3Q9CWU5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Khdc3Q9CWU5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Khdc3Q9CWU5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Khdc3Q9CWU5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Khdc3Q9CWU5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.07■□□□□ 0.96
Khdc3Q9CWU5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Khdc3Q9CWU5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Khdc3Q9CWU5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Khdc3Q9CWU5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Khdc3Q9CWU5 Gm11687-201ENSMUST00000118911 886 ntBASIC21.06■□□□□ 0.96
Khdc3Q9CWU5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Khdc3Q9CWU5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Khdc3Q9CWU5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Khdc3Q9CWU5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Khdc3Q9CWU5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Khdc3Q9CWU5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Khdc3Q9CWU5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Khdc3Q9CWU5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Khdc3Q9CWU5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc3Q9CWU5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.04■□□□□ 0.96
Khdc3Q9CWU5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.04■□□□□ 0.96
Khdc3Q9CWU5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc3Q9CWU5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc3Q9CWU5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc3Q9CWU5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc3Q9CWU5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Khdc3Q9CWU5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc3Q9CWU5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc3Q9CWU5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc3Q9CWU5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Khdc3Q9CWU5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Khdc3Q9CWU5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Khdc3Q9CWU5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Khdc3Q9CWU5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.02■□□□□ 0.96
Khdc3Q9CWU5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Khdc3Q9CWU5 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.02■□□□□ 0.95
Khdc3Q9CWU5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Khdc3Q9CWU5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Khdc3Q9CWU5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Khdc3Q9CWU5 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.01■□□□□ 0.95
Khdc3Q9CWU5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Khdc3Q9CWU5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Khdc3Q9CWU5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Khdc3Q9CWU5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Khdc3Q9CWU5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Khdc3Q9CWU5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Khdc3Q9CWU5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.99■□□□□ 0.95
Khdc3Q9CWU5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Khdc3Q9CWU5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Khdc3Q9CWU5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Khdc3Q9CWU5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Khdc3Q9CWU5 Gm44428-201ENSMUST00000204474 874 ntBASIC20.97■□□□□ 0.95
Khdc3Q9CWU5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Khdc3Q9CWU5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Khdc3Q9CWU5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Khdc3Q9CWU5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Khdc3Q9CWU5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Khdc3Q9CWU5 Gm11175-201ENSMUST00000116172 543 ntBASIC20.96■□□□□ 0.95
Khdc3Q9CWU5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.96■□□□□ 0.95
Khdc3Q9CWU5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Khdc3Q9CWU5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms