Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Lrrc40Q9CRC8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.95■■□□□ 1.1
Lrrc40Q9CRC8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lrrc40Q9CRC8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Lrrc40Q9CRC8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lrrc40Q9CRC8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lrrc40Q9CRC8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lrrc40Q9CRC8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lrrc40Q9CRC8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lrrc40Q9CRC8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lrrc40Q9CRC8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.93■■□□□ 1.1
Lrrc40Q9CRC8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc40Q9CRC8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc40Q9CRC8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc40Q9CRC8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc40Q9CRC8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc40Q9CRC8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc40Q9CRC8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc40Q9CRC8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc40Q9CRC8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc40Q9CRC8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc40Q9CRC8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.91■■□□□ 1.1
Lrrc40Q9CRC8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.91■■□□□ 1.1
Lrrc40Q9CRC8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lrrc40Q9CRC8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lrrc40Q9CRC8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Lrrc40Q9CRC8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.91■■□□□ 1.1
Lrrc40Q9CRC8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.91■■□□□ 1.1
Lrrc40Q9CRC8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lrrc40Q9CRC8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lrrc40Q9CRC8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.9■■□□□ 1.1
Lrrc40Q9CRC8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lrrc40Q9CRC8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.9■■□□□ 1.1
Lrrc40Q9CRC8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Lrrc40Q9CRC8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Lrrc40Q9CRC8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Lrrc40Q9CRC8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.89■■□□□ 1.1
Lrrc40Q9CRC8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lrrc40Q9CRC8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lrrc40Q9CRC8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lrrc40Q9CRC8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lrrc40Q9CRC8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Lrrc40Q9CRC8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lrrc40Q9CRC8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.88■■□□□ 1.09
Lrrc40Q9CRC8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lrrc40Q9CRC8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lrrc40Q9CRC8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lrrc40Q9CRC8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lrrc40Q9CRC8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Lrrc40Q9CRC8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Lrrc40Q9CRC8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lrrc40Q9CRC8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lrrc40Q9CRC8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lrrc40Q9CRC8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Lrrc40Q9CRC8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc40Q9CRC8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc40Q9CRC8 Gm44428-201ENSMUST00000204474 874 ntBASIC21.86■■□□□ 1.09
Lrrc40Q9CRC8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc40Q9CRC8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc40Q9CRC8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc40Q9CRC8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc40Q9CRC8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc40Q9CRC8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc40Q9CRC8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lrrc40Q9CRC8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Lrrc40Q9CRC8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lrrc40Q9CRC8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lrrc40Q9CRC8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lrrc40Q9CRC8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lrrc40Q9CRC8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Lrrc40Q9CRC8 Gm22567-201ENSMUST00000175542 342 ntBASIC21.85■■□□□ 1.09
Lrrc40Q9CRC8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lrrc40Q9CRC8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lrrc40Q9CRC8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lrrc40Q9CRC8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lrrc40Q9CRC8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lrrc40Q9CRC8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Lrrc40Q9CRC8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lrrc40Q9CRC8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lrrc40Q9CRC8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.83■■□□□ 1.09
Lrrc40Q9CRC8 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.83■■□□□ 1.08
Lrrc40Q9CRC8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Lrrc40Q9CRC8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.82■■□□□ 1.08
Lrrc40Q9CRC8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lrrc40Q9CRC8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lrrc40Q9CRC8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
Lrrc40Q9CRC8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Lrrc40Q9CRC8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lrrc40Q9CRC8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lrrc40Q9CRC8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Lrrc40Q9CRC8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Lrrc40Q9CRC8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lrrc40Q9CRC8 Gm9806-201ENSMUST00000051080 552 ntBASIC21.81■■□□□ 1.08
Lrrc40Q9CRC8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Lrrc40Q9CRC8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lrrc40Q9CRC8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lrrc40Q9CRC8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Lrrc40Q9CRC8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.8■■□□□ 1.08
Lrrc40Q9CRC8 Scarna2-201ENSMUST00000157560 414 ntBASIC21.8■■□□□ 1.08
Lrrc40Q9CRC8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms