Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mrpl54Q9CPW3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mrpl54Q9CPW3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Mrpl54Q9CPW3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mrpl54Q9CPW3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mrpl54Q9CPW3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mrpl54Q9CPW3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mrpl54Q9CPW3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Mrpl54Q9CPW3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrpl54Q9CPW3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrpl54Q9CPW3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrpl54Q9CPW3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Mrpl54Q9CPW3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mrpl54Q9CPW3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrpl54Q9CPW3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.74
Mrpl54Q9CPW3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mrpl54Q9CPW3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mrpl54Q9CPW3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mrpl54Q9CPW3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mrpl54Q9CPW3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Mrpl54Q9CPW3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mrpl54Q9CPW3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl54Q9CPW3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl54Q9CPW3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl54Q9CPW3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl54Q9CPW3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl54Q9CPW3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl54Q9CPW3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Mrpl54Q9CPW3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl54Q9CPW3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Mrpl54Q9CPW3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl54Q9CPW3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl54Q9CPW3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl54Q9CPW3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl54Q9CPW3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl54Q9CPW3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.67■□□□□ 0.74
Mrpl54Q9CPW3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.67■□□□□ 0.74
Mrpl54Q9CPW3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl54Q9CPW3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl54Q9CPW3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl54Q9CPW3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Mrpl54Q9CPW3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Mrpl54Q9CPW3 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.66■□□□□ 0.74
Mrpl54Q9CPW3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl54Q9CPW3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl54Q9CPW3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl54Q9CPW3 Gm16148-201ENSMUST00000119653 893 ntBASIC19.65■□□□□ 0.74
Mrpl54Q9CPW3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Mrpl54Q9CPW3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mrpl54Q9CPW3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mrpl54Q9CPW3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Mrpl54Q9CPW3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mrpl54Q9CPW3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mrpl54Q9CPW3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl54Q9CPW3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Mrpl54Q9CPW3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Mrpl54Q9CPW3 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.63■□□□□ 0.73
Mrpl54Q9CPW3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl54Q9CPW3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl54Q9CPW3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.62■□□□□ 0.73
Mrpl54Q9CPW3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Mrpl54Q9CPW3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl54Q9CPW3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl54Q9CPW3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl54Q9CPW3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl54Q9CPW3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.62■□□□□ 0.73
Mrpl54Q9CPW3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.62■□□□□ 0.73
Mrpl54Q9CPW3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Mrpl54Q9CPW3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.61■□□□□ 0.73
Mrpl54Q9CPW3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrpl54Q9CPW3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mrpl54Q9CPW3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Mrpl54Q9CPW3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Mrpl54Q9CPW3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrpl54Q9CPW3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrpl54Q9CPW3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mrpl54Q9CPW3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mrpl54Q9CPW3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.6■□□□□ 0.73
Mrpl54Q9CPW3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mrpl54Q9CPW3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrpl54Q9CPW3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrpl54Q9CPW3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrpl54Q9CPW3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrpl54Q9CPW3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrpl54Q9CPW3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mrpl54Q9CPW3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Mrpl54Q9CPW3 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.58■□□□□ 0.73
Mrpl54Q9CPW3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mrpl54Q9CPW3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mrpl54Q9CPW3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms