Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ska1Q9CPV1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ska1Q9CPV1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
Ska1Q9CPV1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.74■□□□□ 0.91
Ska1Q9CPV1 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.74■□□□□ 0.91
Ska1Q9CPV1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ska1Q9CPV1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ska1Q9CPV1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ska1Q9CPV1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ska1Q9CPV1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ska1Q9CPV1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ska1Q9CPV1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ska1Q9CPV1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ska1Q9CPV1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ska1Q9CPV1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ska1Q9CPV1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ska1Q9CPV1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Ska1Q9CPV1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ska1Q9CPV1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ska1Q9CPV1 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.7■□□□□ 0.9
Ska1Q9CPV1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ska1Q9CPV1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ska1Q9CPV1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ska1Q9CPV1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ska1Q9CPV1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ska1Q9CPV1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ska1Q9CPV1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ska1Q9CPV1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ska1Q9CPV1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.69■□□□□ 0.9
Ska1Q9CPV1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska1Q9CPV1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska1Q9CPV1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ska1Q9CPV1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ska1Q9CPV1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska1Q9CPV1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska1Q9CPV1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ska1Q9CPV1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska1Q9CPV1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska1Q9CPV1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ska1Q9CPV1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Ska1Q9CPV1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ska1Q9CPV1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ska1Q9CPV1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ska1Q9CPV1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ska1Q9CPV1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ska1Q9CPV1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska1Q9CPV1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ska1Q9CPV1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska1Q9CPV1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.65■□□□□ 0.9
Ska1Q9CPV1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ska1Q9CPV1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska1Q9CPV1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska1Q9CPV1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ska1Q9CPV1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ska1Q9CPV1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ska1Q9CPV1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ska1Q9CPV1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ska1Q9CPV1 Gm7432-201ENSMUST00000210343 879 ntBASIC20.64■□□□□ 0.89
Ska1Q9CPV1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ska1Q9CPV1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ska1Q9CPV1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.63■□□□□ 0.89
Ska1Q9CPV1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ska1Q9CPV1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ska1Q9CPV1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ska1Q9CPV1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ska1Q9CPV1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska1Q9CPV1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska1Q9CPV1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska1Q9CPV1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska1Q9CPV1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ska1Q9CPV1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ska1Q9CPV1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ska1Q9CPV1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.61■□□□□ 0.89
Ska1Q9CPV1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.61■□□□□ 0.89
Ska1Q9CPV1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.61■□□□□ 0.89
Ska1Q9CPV1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.61■□□□□ 0.89
Ska1Q9CPV1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ska1Q9CPV1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska1Q9CPV1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska1Q9CPV1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ska1Q9CPV1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.6■□□□□ 0.89
Ska1Q9CPV1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska1Q9CPV1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ska1Q9CPV1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ska1Q9CPV1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.59■□□□□ 0.89
Ska1Q9CPV1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ska1Q9CPV1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ska1Q9CPV1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.58■□□□□ 0.89
Ska1Q9CPV1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.58■□□□□ 0.89
Ska1Q9CPV1 Gm4799-201ENSMUST00000095396 657 ntBASIC20.58■□□□□ 0.89
Ska1Q9CPV1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ska1Q9CPV1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ska1Q9CPV1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ska1Q9CPV1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ska1Q9CPV1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ska1Q9CPV1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ska1Q9CPV1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ska1Q9CPV1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ska1Q9CPV1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.57■□□□□ 0.88
Ska1Q9CPV1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms