Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf111Q99ML9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf111Q99ML9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Rnf111Q99ML9 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.42■■□□□ 1.02
Rnf111Q99ML9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.42■■□□□ 1.02
Rnf111Q99ML9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf111Q99ML9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf111Q99ML9 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.42■■□□□ 1.02
Rnf111Q99ML9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf111Q99ML9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf111Q99ML9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.41■■□□□ 1.02
Rnf111Q99ML9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rnf111Q99ML9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf111Q99ML9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.4■■□□□ 1.02
Rnf111Q99ML9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf111Q99ML9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Rnf111Q99ML9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf111Q99ML9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf111Q99ML9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf111Q99ML9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.39■■□□□ 1.01
Rnf111Q99ML9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf111Q99ML9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rnf111Q99ML9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rnf111Q99ML9 Mir3960-201ENSMUST00000198213 73 ntBASIC21.38■■□□□ 1.01
Rnf111Q99ML9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.38■■□□□ 1.01
Rnf111Q99ML9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf111Q99ML9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf111Q99ML9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf111Q99ML9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Rnf111Q99ML9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf111Q99ML9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf111Q99ML9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf111Q99ML9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Rnf111Q99ML9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf111Q99ML9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf111Q99ML9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.36■■□□□ 1.01
Rnf111Q99ML9 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.36■■□□□ 1.01
Rnf111Q99ML9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf111Q99ML9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.35■■□□□ 1.01
Rnf111Q99ML9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf111Q99ML9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf111Q99ML9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf111Q99ML9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf111Q99ML9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf111Q99ML9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf111Q99ML9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf111Q99ML9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf111Q99ML9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf111Q99ML9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf111Q99ML9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf111Q99ML9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Rnf111Q99ML9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf111Q99ML9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf111Q99ML9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.31■■□□□ 1
Rnf111Q99ML9 Gm45364-201ENSMUST00000210883 159 ntBASIC21.31■■□□□ 1
Rnf111Q99ML9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf111Q99ML9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rnf111Q99ML9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.3■■□□□ 1
Rnf111Q99ML9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.3■■□□□ 1
Rnf111Q99ML9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.3■■□□□ 1
Rnf111Q99ML9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rnf111Q99ML9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.29■■□□□ 1
Rnf111Q99ML9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf111Q99ML9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Rnf111Q99ML9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rnf111Q99ML9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rnf111Q99ML9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf111Q99ML9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf111Q99ML9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.28■■□□□ 1
Rnf111Q99ML9 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.28■■□□□ 1
Rnf111Q99ML9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rnf111Q99ML9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rnf111Q99ML9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rnf111Q99ML9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rnf111Q99ML9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf111Q99ML9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf111Q99ML9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.27■■□□□ 1
Rnf111Q99ML9 Gm6311-201ENSMUST00000073790 878 ntBASIC21.27■■□□□ 1
Rnf111Q99ML9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf111Q99ML9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf111Q99ML9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf111Q99ML9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf111Q99ML9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf111Q99ML9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf111Q99ML9 Gm9812-201ENSMUST00000061934 968 ntBASIC21.26■□□□□ 0.99
Rnf111Q99ML9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rnf111Q99ML9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf111Q99ML9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Rnf111Q99ML9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.26■□□□□ 0.99
Rnf111Q99ML9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.25■□□□□ 0.99
Rnf111Q99ML9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rnf111Q99ML9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.25■□□□□ 0.99
Rnf111Q99ML9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.25■□□□□ 0.99
Rnf111Q99ML9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf111Q99ML9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf111Q99ML9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.25■□□□□ 0.99
Rnf111Q99ML9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 145.5 ms