Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkd1Q99MH6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkd1Q99MH6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nkd1Q99MH6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkd1Q99MH6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nkd1Q99MH6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkd1Q99MH6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Nkd1Q99MH6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkd1Q99MH6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkd1Q99MH6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkd1Q99MH6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.74■□□□□ 0.91
Nkd1Q99MH6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkd1Q99MH6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nkd1Q99MH6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkd1Q99MH6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.73■□□□□ 0.91
Nkd1Q99MH6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkd1Q99MH6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkd1Q99MH6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkd1Q99MH6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkd1Q99MH6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Nkd1Q99MH6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.72■□□□□ 0.91
Nkd1Q99MH6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkd1Q99MH6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkd1Q99MH6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkd1Q99MH6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkd1Q99MH6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nkd1Q99MH6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nkd1Q99MH6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkd1Q99MH6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkd1Q99MH6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.7■□□□□ 0.9
Nkd1Q99MH6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Nkd1Q99MH6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkd1Q99MH6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkd1Q99MH6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nkd1Q99MH6 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.68■□□□□ 0.9
Nkd1Q99MH6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkd1Q99MH6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkd1Q99MH6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.68■□□□□ 0.9
Nkd1Q99MH6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkd1Q99MH6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nkd1Q99MH6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nkd1Q99MH6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkd1Q99MH6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkd1Q99MH6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkd1Q99MH6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.67■□□□□ 0.9
Nkd1Q99MH6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkd1Q99MH6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkd1Q99MH6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkd1Q99MH6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nkd1Q99MH6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkd1Q99MH6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkd1Q99MH6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkd1Q99MH6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkd1Q99MH6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkd1Q99MH6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkd1Q99MH6 Mir3960-201ENSMUST00000198213 73 ntBASIC20.66■□□□□ 0.9
Nkd1Q99MH6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.66■□□□□ 0.9
Nkd1Q99MH6 Gm7432-201ENSMUST00000210343 879 ntBASIC20.66■□□□□ 0.9
Nkd1Q99MH6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.66■□□□□ 0.9
Nkd1Q99MH6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkd1Q99MH6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkd1Q99MH6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkd1Q99MH6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nkd1Q99MH6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkd1Q99MH6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkd1Q99MH6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Nkd1Q99MH6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkd1Q99MH6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.65■□□□□ 0.9
Nkd1Q99MH6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkd1Q99MH6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nkd1Q99MH6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkd1Q99MH6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkd1Q99MH6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkd1Q99MH6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nkd1Q99MH6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nkd1Q99MH6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.64■□□□□ 0.89
Nkd1Q99MH6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Nkd1Q99MH6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nkd1Q99MH6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nkd1Q99MH6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd1Q99MH6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd1Q99MH6 Gm9812-201ENSMUST00000061934 968 ntBASIC20.63■□□□□ 0.89
Nkd1Q99MH6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd1Q99MH6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd1Q99MH6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd1Q99MH6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nkd1Q99MH6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd1Q99MH6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Nkd1Q99MH6 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.62■□□□□ 0.89
Nkd1Q99MH6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd1Q99MH6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.61■□□□□ 0.89
Nkd1Q99MH6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkd1Q99MH6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkd1Q99MH6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.61■□□□□ 0.89
Nkd1Q99MH6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkd1Q99MH6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nkd1Q99MH6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkd1Q99MH6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkd1Q99MH6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkd1Q99MH6 Gm11599-201ENSMUST00000118720 878 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms