Protein–RNA interactions for Protein: Q99J79

Ddb2, DNA damage-binding protein 2, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb2Q99J79 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddb2Q99J79 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb2Q99J79 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ddb2Q99J79 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb2Q99J79 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb2Q99J79 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb2Q99J79 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb2Q99J79 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddb2Q99J79 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb2Q99J79 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb2Q99J79 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb2Q99J79 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddb2Q99J79 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Ddb2Q99J79 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Ddb2Q99J79 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ddb2Q99J79 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.48■□□□□ 0.71
Ddb2Q99J79 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ddb2Q99J79 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddb2Q99J79 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.48■□□□□ 0.71
Ddb2Q99J79 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddb2Q99J79 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddb2Q99J79 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddb2Q99J79 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddb2Q99J79 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddb2Q99J79 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddb2Q99J79 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.47■□□□□ 0.71
Ddb2Q99J79 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddb2Q99J79 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ddb2Q99J79 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddb2Q99J79 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.46■□□□□ 0.71
Ddb2Q99J79 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ddb2Q99J79 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ddb2Q99J79 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ddb2Q99J79 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddb2Q99J79 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddb2Q99J79 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddb2Q99J79 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddb2Q99J79 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddb2Q99J79 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddb2Q99J79 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddb2Q99J79 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddb2Q99J79 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddb2Q99J79 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ddb2Q99J79 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddb2Q99J79 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddb2Q99J79 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddb2Q99J79 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.44■□□□□ 0.7
Ddb2Q99J79 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddb2Q99J79 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddb2Q99J79 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddb2Q99J79 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddb2Q99J79 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.43■□□□□ 0.7
Ddb2Q99J79 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddb2Q99J79 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddb2Q99J79 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ddb2Q99J79 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.43■□□□□ 0.7
Ddb2Q99J79 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddb2Q99J79 Gm14523-201ENSMUST00000117260 558 ntBASIC19.42■□□□□ 0.7
Ddb2Q99J79 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.42■□□□□ 0.7
Ddb2Q99J79 Gm12366-201ENSMUST00000121722 873 ntBASIC19.42■□□□□ 0.7
Ddb2Q99J79 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.42■□□□□ 0.7
Ddb2Q99J79 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ddb2Q99J79 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.42■□□□□ 0.7
Ddb2Q99J79 Gm5786-201ENSMUST00000085368 882 ntBASIC19.42■□□□□ 0.7
Ddb2Q99J79 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.42■□□□□ 0.7
Ddb2Q99J79 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddb2Q99J79 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddb2Q99J79 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddb2Q99J79 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddb2Q99J79 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddb2Q99J79 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddb2Q99J79 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddb2Q99J79 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.4■□□□□ 0.7
Ddb2Q99J79 Gm7332-201ENSMUST00000118351 454 ntBASIC19.4■□□□□ 0.7
Ddb2Q99J79 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.4■□□□□ 0.7
Ddb2Q99J79 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.39■□□□□ 0.69
Ddb2Q99J79 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.39■□□□□ 0.69
Ddb2Q99J79 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddb2Q99J79 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddb2Q99J79 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddb2Q99J79 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ddb2Q99J79 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddb2Q99J79 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.38■□□□□ 0.69
Ddb2Q99J79 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddb2Q99J79 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ddb2Q99J79 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddb2Q99J79 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ddb2Q99J79 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.37■□□□□ 0.69
Ddb2Q99J79 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ddb2Q99J79 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ddb2Q99J79 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.37■□□□□ 0.69
Ddb2Q99J79 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddb2Q99J79 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddb2Q99J79 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddb2Q99J79 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddb2Q99J79 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddb2Q99J79 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddb2Q99J79 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.36■□□□□ 0.69
Ddb2Q99J79 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddb2Q99J79 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms