Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chmp1aQ921W0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Chmp1aQ921W0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chmp1aQ921W0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1aQ921W0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1aQ921W0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chmp1aQ921W0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.41■□□□□ 0.7
Chmp1aQ921W0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1aQ921W0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1aQ921W0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp1aQ921W0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.4■□□□□ 0.7
Chmp1aQ921W0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1aQ921W0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1aQ921W0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1aQ921W0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1aQ921W0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1aQ921W0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1aQ921W0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1aQ921W0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1aQ921W0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1aQ921W0 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.39■□□□□ 0.69
Chmp1aQ921W0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp1aQ921W0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.38■□□□□ 0.69
Chmp1aQ921W0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp1aQ921W0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.38■□□□□ 0.69
Chmp1aQ921W0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1aQ921W0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.37■□□□□ 0.69
Chmp1aQ921W0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.37■□□□□ 0.69
Chmp1aQ921W0 Gm37136-201ENSMUST00000194368 194 ntBASIC19.37■□□□□ 0.69
Chmp1aQ921W0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.37■□□□□ 0.69
Chmp1aQ921W0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Chmp1aQ921W0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1aQ921W0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1aQ921W0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chmp1aQ921W0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1aQ921W0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.36■□□□□ 0.69
Chmp1aQ921W0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1aQ921W0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1aQ921W0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1aQ921W0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.36■□□□□ 0.69
Chmp1aQ921W0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp1aQ921W0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Chmp1aQ921W0 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.35■□□□□ 0.69
Chmp1aQ921W0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1aQ921W0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1aQ921W0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Chmp1aQ921W0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1aQ921W0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1aQ921W0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp1aQ921W0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1aQ921W0 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.33■□□□□ 0.69
Chmp1aQ921W0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Chmp1aQ921W0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp1aQ921W0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp1aQ921W0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp1aQ921W0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Chmp1aQ921W0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp1aQ921W0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp1aQ921W0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1aQ921W0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1aQ921W0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.32■□□□□ 0.68
Chmp1aQ921W0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1aQ921W0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1aQ921W0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1aQ921W0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1aQ921W0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Chmp1aQ921W0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1aQ921W0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp1aQ921W0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp1aQ921W0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp1aQ921W0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp1aQ921W0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp1aQ921W0 Nkain2-201ENSMUST00000092602 558 ntBASIC19.3■□□□□ 0.68
Chmp1aQ921W0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.3■□□□□ 0.68
Chmp1aQ921W0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp1aQ921W0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp1aQ921W0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp1aQ921W0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp1aQ921W0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp1aQ921W0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp1aQ921W0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp1aQ921W0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp1aQ921W0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp1aQ921W0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.28■□□□□ 0.68
Chmp1aQ921W0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp1aQ921W0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp1aQ921W0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Chmp1aQ921W0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp1aQ921W0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Chmp1aQ921W0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp1aQ921W0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Chmp1aQ921W0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp1aQ921W0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp1aQ921W0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Chmp1aQ921W0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Chmp1aQ921W0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp1aQ921W0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp1aQ921W0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp1aQ921W0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.26■□□□□ 0.67
Chmp1aQ921W0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms