Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhb5Q91XZ5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
Pcdhb5Q91XZ5 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.39■■□□□ 1.82
Pcdhb5Q91XZ5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Pcdhb5Q91XZ5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Pcdhb5Q91XZ5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb5Q91XZ5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb5Q91XZ5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb5Q91XZ5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb5Q91XZ5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhb5Q91XZ5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb5Q91XZ5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb5Q91XZ5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb5Q91XZ5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb5Q91XZ5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.36■■□□□ 1.81
Pcdhb5Q91XZ5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb5Q91XZ5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb5Q91XZ5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.35■■□□□ 1.81
Pcdhb5Q91XZ5 Gm45102-201ENSMUST00000207427 857 ntBASIC26.35■■□□□ 1.81
Pcdhb5Q91XZ5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb5Q91XZ5 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.35■■□□□ 1.81
Pcdhb5Q91XZ5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb5Q91XZ5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb5Q91XZ5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb5Q91XZ5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb5Q91XZ5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhb5Q91XZ5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhb5Q91XZ5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Pcdhb5Q91XZ5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb5Q91XZ5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb5Q91XZ5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb5Q91XZ5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb5Q91XZ5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Pcdhb5Q91XZ5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Pcdhb5Q91XZ5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC26.32■■□□□ 1.8
Pcdhb5Q91XZ5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb5Q91XZ5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb5Q91XZ5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb5Q91XZ5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb5Q91XZ5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb5Q91XZ5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhb5Q91XZ5 Gm14117-201ENSMUST00000122417 843 ntBASIC26.3■■□□□ 1.8
Pcdhb5Q91XZ5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC26.3■■□□□ 1.8
Pcdhb5Q91XZ5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhb5Q91XZ5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhb5Q91XZ5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Pcdhb5Q91XZ5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC26.29■■□□□ 1.8
Pcdhb5Q91XZ5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Pcdhb5Q91XZ5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhb5Q91XZ5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhb5Q91XZ5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhb5Q91XZ5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhb5Q91XZ5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhb5Q91XZ5 Gm9959-201ENSMUST00000068277 390 ntBASIC26.27■■□□□ 1.8
Pcdhb5Q91XZ5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhb5Q91XZ5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb5Q91XZ5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb5Q91XZ5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb5Q91XZ5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb5Q91XZ5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb5Q91XZ5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb5Q91XZ5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb5Q91XZ5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb5Q91XZ5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdhb5Q91XZ5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Pcdhb5Q91XZ5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
Pcdhb5Q91XZ5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.24■■□□□ 1.79
Pcdhb5Q91XZ5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.24■■□□□ 1.79
Pcdhb5Q91XZ5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.24■■□□□ 1.79
Pcdhb5Q91XZ5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC26.24■■□□□ 1.79
Pcdhb5Q91XZ5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhb5Q91XZ5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Pcdhb5Q91XZ5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhb5Q91XZ5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhb5Q91XZ5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Pcdhb5Q91XZ5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
Pcdhb5Q91XZ5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhb5Q91XZ5 Gm10232-201ENSMUST00000089221 720 ntBASIC26.23■■□□□ 1.79
Pcdhb5Q91XZ5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhb5Q91XZ5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.23■■□□□ 1.79
Pcdhb5Q91XZ5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb5Q91XZ5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb5Q91XZ5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.22■■□□□ 1.79
Pcdhb5Q91XZ5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb5Q91XZ5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Pcdhb5Q91XZ5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhb5Q91XZ5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhb5Q91XZ5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhb5Q91XZ5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
Pcdhb5Q91XZ5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
Pcdhb5Q91XZ5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhb5Q91XZ5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
Pcdhb5Q91XZ5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Pcdhb5Q91XZ5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhb5Q91XZ5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhb5Q91XZ5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhb5Q91XZ5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhb5Q91XZ5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhb5Q91XZ5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Pcdhb5Q91XZ5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms