Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Trex1Q91XB0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Trex1Q91XB0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Trex1Q91XB0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.7■■□□□ 1.7
Trex1Q91XB0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trex1Q91XB0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Trex1Q91XB0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Trex1Q91XB0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trex1Q91XB0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Trex1Q91XB0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.68■■□□□ 1.7
Trex1Q91XB0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Trex1Q91XB0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trex1Q91XB0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trex1Q91XB0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trex1Q91XB0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Rps24-207ENSMUST00000224568 714 ntBASIC25.67■■□□□ 1.7
Trex1Q91XB0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Trex1Q91XB0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Trex1Q91XB0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trex1Q91XB0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trex1Q91XB0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trex1Q91XB0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trex1Q91XB0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Trex1Q91XB0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
Trex1Q91XB0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trex1Q91XB0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trex1Q91XB0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trex1Q91XB0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.64■■□□□ 1.7
Trex1Q91XB0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.64■■□□□ 1.7
Trex1Q91XB0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.64■■□□□ 1.7
Trex1Q91XB0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trex1Q91XB0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Trex1Q91XB0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Trex1Q91XB0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trex1Q91XB0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trex1Q91XB0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trex1Q91XB0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.63■■□□□ 1.69
Trex1Q91XB0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trex1Q91XB0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trex1Q91XB0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trex1Q91XB0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.62■■□□□ 1.69
Trex1Q91XB0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Trex1Q91XB0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Trex1Q91XB0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
Trex1Q91XB0 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.62■■□□□ 1.69
Trex1Q91XB0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trex1Q91XB0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
Trex1Q91XB0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Trex1Q91XB0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Trex1Q91XB0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Trex1Q91XB0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trex1Q91XB0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trex1Q91XB0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Trex1Q91XB0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Trex1Q91XB0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Trex1Q91XB0 Gm45102-201ENSMUST00000207427 857 ntBASIC25.6■■□□□ 1.69
Trex1Q91XB0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trex1Q91XB0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.6■■□□□ 1.69
Trex1Q91XB0 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.6■■□□□ 1.69
Trex1Q91XB0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trex1Q91XB0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trex1Q91XB0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Trex1Q91XB0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trex1Q91XB0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Trex1Q91XB0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Trex1Q91XB0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trex1Q91XB0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trex1Q91XB0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trex1Q91XB0 Gm14117-201ENSMUST00000122417 843 ntBASIC25.58■■□□□ 1.69
Trex1Q91XB0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Trex1Q91XB0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
Trex1Q91XB0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trex1Q91XB0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trex1Q91XB0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trex1Q91XB0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trex1Q91XB0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trex1Q91XB0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Trex1Q91XB0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trex1Q91XB0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trex1Q91XB0 Gm9959-201ENSMUST00000068277 390 ntBASIC25.55■■□□□ 1.68
Trex1Q91XB0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Trex1Q91XB0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trex1Q91XB0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.54■■□□□ 1.68
Trex1Q91XB0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trex1Q91XB0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Trex1Q91XB0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.54■■□□□ 1.68
Trex1Q91XB0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
Trex1Q91XB0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trex1Q91XB0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
Trex1Q91XB0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.53■■□□□ 1.68
Trex1Q91XB0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms