Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb21Q91V48 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb21Q91V48 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.81■■□□□ 1.08
Pcdhb21Q91V48 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.81■■□□□ 1.08
Pcdhb21Q91V48 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb21Q91V48 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb21Q91V48 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb21Q91V48 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb21Q91V48 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb21Q91V48 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 Gm14523-201ENSMUST00000117260 558 ntBASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb21Q91V48 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb21Q91V48 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb21Q91V48 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.78■■□□□ 1.08
Pcdhb21Q91V48 Gm12366-201ENSMUST00000121722 873 ntBASIC21.78■■□□□ 1.08
Pcdhb21Q91V48 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhb21Q91V48 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.78■■□□□ 1.08
Pcdhb21Q91V48 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Pcdhb21Q91V48 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.78■■□□□ 1.08
Pcdhb21Q91V48 Gm5786-201ENSMUST00000085368 882 ntBASIC21.78■■□□□ 1.08
Pcdhb21Q91V48 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb21Q91V48 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhb21Q91V48 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb21Q91V48 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhb21Q91V48 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb21Q91V48 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb21Q91V48 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb21Q91V48 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhb21Q91V48 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhb21Q91V48 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb21Q91V48 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb21Q91V48 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb21Q91V48 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb21Q91V48 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhb21Q91V48 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhb21Q91V48 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb21Q91V48 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb21Q91V48 Gm7332-201ENSMUST00000118351 454 ntBASIC21.75■■□□□ 1.07
Pcdhb21Q91V48 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb21Q91V48 Gm27502-201ENSMUST00000183495 199 ntBASIC21.75■■□□□ 1.07
Pcdhb21Q91V48 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb21Q91V48 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb21Q91V48 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb21Q91V48 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb21Q91V48 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb21Q91V48 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb21Q91V48 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb21Q91V48 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb21Q91V48 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhb21Q91V48 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb21Q91V48 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pcdhb21Q91V48 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb21Q91V48 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb21Q91V48 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.72■■□□□ 1.07
Pcdhb21Q91V48 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb21Q91V48 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb21Q91V48 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb21Q91V48 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb21Q91V48 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb21Q91V48 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb21Q91V48 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
Pcdhb21Q91V48 Cap2-205ENSMUST00000225824 1634 ntBASIC21.71■■□□□ 1.07
Pcdhb21Q91V48 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb21Q91V48 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pcdhb21Q91V48 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb21Q91V48 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb21Q91V48 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.7■■□□□ 1.07
Pcdhb21Q91V48 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb21Q91V48 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb21Q91V48 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb21Q91V48 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdhb21Q91V48 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhb21Q91V48 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb21Q91V48 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb21Q91V48 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb21Q91V48 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb21Q91V48 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdhb21Q91V48 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb21Q91V48 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb21Q91V48 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.69■■□□□ 1.06
Pcdhb21Q91V48 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcdhb21Q91V48 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb21Q91V48 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb21Q91V48 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb21Q91V48 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdhb21Q91V48 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb21Q91V48 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb21Q91V48 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb21Q91V48 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb21Q91V48 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb21Q91V48 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms