Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Odf4Q8VI88 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Odf4Q8VI88 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.52■□□□□ 0.72
Odf4Q8VI88 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Odf4Q8VI88 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
Odf4Q8VI88 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.52■□□□□ 0.72
Odf4Q8VI88 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Odf4Q8VI88 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Odf4Q8VI88 Gm27502-201ENSMUST00000183495 199 ntBASIC19.51■□□□□ 0.71
Odf4Q8VI88 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Odf4Q8VI88 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Odf4Q8VI88 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Odf4Q8VI88 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Odf4Q8VI88 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Odf4Q8VI88 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Odf4Q8VI88 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Odf4Q8VI88 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Odf4Q8VI88 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Odf4Q8VI88 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Odf4Q8VI88 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.49■□□□□ 0.71
Odf4Q8VI88 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Odf4Q8VI88 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Odf4Q8VI88 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Odf4Q8VI88 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Odf4Q8VI88 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Odf4Q8VI88 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Odf4Q8VI88 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Odf4Q8VI88 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Odf4Q8VI88 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Odf4Q8VI88 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Odf4Q8VI88 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Odf4Q8VI88 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Odf4Q8VI88 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Odf4Q8VI88 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Odf4Q8VI88 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Odf4Q8VI88 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Odf4Q8VI88 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Odf4Q8VI88 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.46■□□□□ 0.71
Odf4Q8VI88 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Odf4Q8VI88 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Odf4Q8VI88 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Odf4Q8VI88 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Odf4Q8VI88 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Odf4Q8VI88 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Odf4Q8VI88 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Odf4Q8VI88 Gm7332-201ENSMUST00000118351 454 ntBASIC19.45■□□□□ 0.7
Odf4Q8VI88 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Odf4Q8VI88 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Odf4Q8VI88 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Odf4Q8VI88 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Odf4Q8VI88 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Odf4Q8VI88 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Odf4Q8VI88 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Odf4Q8VI88 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Odf4Q8VI88 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Odf4Q8VI88 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Odf4Q8VI88 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.44■□□□□ 0.7
Odf4Q8VI88 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Odf4Q8VI88 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Odf4Q8VI88 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Odf4Q8VI88 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Odf4Q8VI88 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.43■□□□□ 0.7
Odf4Q8VI88 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Odf4Q8VI88 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.43■□□□□ 0.7
Odf4Q8VI88 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Odf4Q8VI88 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Odf4Q8VI88 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Odf4Q8VI88 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.42■□□□□ 0.7
Odf4Q8VI88 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.42■□□□□ 0.7
Odf4Q8VI88 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Odf4Q8VI88 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Odf4Q8VI88 Gm9812-201ENSMUST00000061934 968 ntBASIC19.42■□□□□ 0.7
Odf4Q8VI88 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Odf4Q8VI88 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Odf4Q8VI88 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Odf4Q8VI88 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Odf4Q8VI88 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Odf4Q8VI88 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Odf4Q8VI88 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Odf4Q8VI88 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.41■□□□□ 0.7
Odf4Q8VI88 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Odf4Q8VI88 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.41■□□□□ 0.7
Odf4Q8VI88 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Odf4Q8VI88 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Odf4Q8VI88 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Odf4Q8VI88 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Odf4Q8VI88 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Odf4Q8VI88 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Odf4Q8VI88 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Odf4Q8VI88 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Odf4Q8VI88 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Odf4Q8VI88 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Odf4Q8VI88 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Odf4Q8VI88 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Odf4Q8VI88 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Odf4Q8VI88 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.39■□□□□ 0.69
Odf4Q8VI88 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Odf4Q8VI88 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Odf4Q8VI88 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.39■□□□□ 0.69
Odf4Q8VI88 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms