Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cdhr1Q8VHP6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdhr1Q8VHP6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdhr1Q8VHP6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cdhr1Q8VHP6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdhr1Q8VHP6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.61■■□□□ 1.05
Cdhr1Q8VHP6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
Cdhr1Q8VHP6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdhr1Q8VHP6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdhr1Q8VHP6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdhr1Q8VHP6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cdhr1Q8VHP6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Cdhr1Q8VHP6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdhr1Q8VHP6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cdhr1Q8VHP6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cdhr1Q8VHP6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cdhr1Q8VHP6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cdhr1Q8VHP6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdhr1Q8VHP6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cdhr1Q8VHP6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdhr1Q8VHP6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdhr1Q8VHP6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.58■■□□□ 1.05
Cdhr1Q8VHP6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdhr1Q8VHP6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdhr1Q8VHP6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdhr1Q8VHP6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr1Q8VHP6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr1Q8VHP6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr1Q8VHP6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.57■■□□□ 1.04
Cdhr1Q8VHP6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr1Q8VHP6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Cdhr1Q8VHP6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Cdhr1Q8VHP6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.56■■□□□ 1.04
Cdhr1Q8VHP6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.56■■□□□ 1.04
Cdhr1Q8VHP6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cdhr1Q8VHP6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.55■■□□□ 1.04
Cdhr1Q8VHP6 Gm15820-201ENSMUST00000201566 728 ntBASIC21.55■■□□□ 1.04
Cdhr1Q8VHP6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdhr1Q8VHP6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdhr1Q8VHP6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdhr1Q8VHP6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdhr1Q8VHP6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cdhr1Q8VHP6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdhr1Q8VHP6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Cdhr1Q8VHP6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdhr1Q8VHP6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdhr1Q8VHP6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cdhr1Q8VHP6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdhr1Q8VHP6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cdhr1Q8VHP6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Cdhr1Q8VHP6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdhr1Q8VHP6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdhr1Q8VHP6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cdhr1Q8VHP6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdhr1Q8VHP6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cdhr1Q8VHP6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdhr1Q8VHP6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cdhr1Q8VHP6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdhr1Q8VHP6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cdhr1Q8VHP6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.51■■□□□ 1.03
Cdhr1Q8VHP6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.51■■□□□ 1.03
Cdhr1Q8VHP6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdhr1Q8VHP6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.51■■□□□ 1.03
Cdhr1Q8VHP6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdhr1Q8VHP6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdhr1Q8VHP6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdhr1Q8VHP6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdhr1Q8VHP6 Gm22567-201ENSMUST00000175542 342 ntBASIC21.5■■□□□ 1.03
Cdhr1Q8VHP6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.5■■□□□ 1.03
Cdhr1Q8VHP6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Cdhr1Q8VHP6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdhr1Q8VHP6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdhr1Q8VHP6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdhr1Q8VHP6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdhr1Q8VHP6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.49■■□□□ 1.03
Cdhr1Q8VHP6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdhr1Q8VHP6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdhr1Q8VHP6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Cdhr1Q8VHP6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdhr1Q8VHP6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cdhr1Q8VHP6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdhr1Q8VHP6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cdhr1Q8VHP6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.47■■□□□ 1.03
Cdhr1Q8VHP6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.47■■□□□ 1.03
Cdhr1Q8VHP6 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.47■■□□□ 1.03
Cdhr1Q8VHP6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdhr1Q8VHP6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdhr1Q8VHP6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdhr1Q8VHP6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdhr1Q8VHP6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms