Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ndc1Q8VCB1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ndc1Q8VCB1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ndc1Q8VCB1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ndc1Q8VCB1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ndc1Q8VCB1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ndc1Q8VCB1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.78■□□□□ 0.92
Ndc1Q8VCB1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ndc1Q8VCB1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ndc1Q8VCB1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ndc1Q8VCB1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ndc1Q8VCB1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ndc1Q8VCB1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ndc1Q8VCB1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ndc1Q8VCB1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ndc1Q8VCB1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.77■□□□□ 0.91
Ndc1Q8VCB1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ndc1Q8VCB1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ndc1Q8VCB1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ndc1Q8VCB1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ndc1Q8VCB1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ndc1Q8VCB1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ndc1Q8VCB1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ndc1Q8VCB1 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.76■□□□□ 0.91
Ndc1Q8VCB1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ndc1Q8VCB1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ndc1Q8VCB1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ndc1Q8VCB1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ndc1Q8VCB1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ndc1Q8VCB1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.75■□□□□ 0.91
Ndc1Q8VCB1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc1Q8VCB1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc1Q8VCB1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc1Q8VCB1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc1Q8VCB1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ndc1Q8VCB1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndc1Q8VCB1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndc1Q8VCB1 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.73■□□□□ 0.91
Ndc1Q8VCB1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ndc1Q8VCB1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ndc1Q8VCB1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ndc1Q8VCB1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ndc1Q8VCB1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ndc1Q8VCB1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ndc1Q8VCB1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ndc1Q8VCB1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ndc1Q8VCB1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ndc1Q8VCB1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ndc1Q8VCB1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ndc1Q8VCB1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ndc1Q8VCB1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ndc1Q8VCB1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.69■□□□□ 0.9
Ndc1Q8VCB1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ndc1Q8VCB1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ndc1Q8VCB1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.69■□□□□ 0.9
Ndc1Q8VCB1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ndc1Q8VCB1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ndc1Q8VCB1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ndc1Q8VCB1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ndc1Q8VCB1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ndc1Q8VCB1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Ndc1Q8VCB1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.68■□□□□ 0.9
Ndc1Q8VCB1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ndc1Q8VCB1 Gm5812-201ENSMUST00000061073 957 ntBASIC20.68■□□□□ 0.9
Ndc1Q8VCB1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ndc1Q8VCB1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.68■□□□□ 0.9
Ndc1Q8VCB1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ndc1Q8VCB1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ndc1Q8VCB1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
Ndc1Q8VCB1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ndc1Q8VCB1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ndc1Q8VCB1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ndc1Q8VCB1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ndc1Q8VCB1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ndc1Q8VCB1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.65■□□□□ 0.9
Ndc1Q8VCB1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ndc1Q8VCB1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ndc1Q8VCB1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ndc1Q8VCB1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ndc1Q8VCB1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ndc1Q8VCB1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ndc1Q8VCB1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Ndc1Q8VCB1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ndc1Q8VCB1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ndc1Q8VCB1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ndc1Q8VCB1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ndc1Q8VCB1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ndc1Q8VCB1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms