Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.45■■□□□ 1.18
Ssx2ipQ8VC66 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ssx2ipQ8VC66 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ssx2ipQ8VC66 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ssx2ipQ8VC66 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ssx2ipQ8VC66 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ssx2ipQ8VC66 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.44■■□□□ 1.18
Ssx2ipQ8VC66 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ssx2ipQ8VC66 Scarna2-201ENSMUST00000157560 414 ntBASIC22.44■■□□□ 1.18
Ssx2ipQ8VC66 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.44■■□□□ 1.18
Ssx2ipQ8VC66 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ssx2ipQ8VC66 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ssx2ipQ8VC66 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ssx2ipQ8VC66 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ssx2ipQ8VC66 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ssx2ipQ8VC66 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ssx2ipQ8VC66 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ssx2ipQ8VC66 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ssx2ipQ8VC66 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.42■■□□□ 1.18
Ssx2ipQ8VC66 Gm11687-201ENSMUST00000118911 886 ntBASIC22.42■■□□□ 1.18
Ssx2ipQ8VC66 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ssx2ipQ8VC66 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Ssx2ipQ8VC66 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ssx2ipQ8VC66 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Ssx2ipQ8VC66 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.41■■□□□ 1.18
Ssx2ipQ8VC66 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Ssx2ipQ8VC66 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ssx2ipQ8VC66 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ssx2ipQ8VC66 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ssx2ipQ8VC66 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Ssx2ipQ8VC66 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.4■■□□□ 1.18
Ssx2ipQ8VC66 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ssx2ipQ8VC66 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ssx2ipQ8VC66 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ssx2ipQ8VC66 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.4■■□□□ 1.18
Ssx2ipQ8VC66 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ssx2ipQ8VC66 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ssx2ipQ8VC66 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssx2ipQ8VC66 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ssx2ipQ8VC66 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssx2ipQ8VC66 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssx2ipQ8VC66 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssx2ipQ8VC66 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssx2ipQ8VC66 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssx2ipQ8VC66 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Ssx2ipQ8VC66 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.38■■□□□ 1.17
Ssx2ipQ8VC66 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ssx2ipQ8VC66 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ssx2ipQ8VC66 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ssx2ipQ8VC66 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Ssx2ipQ8VC66 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ssx2ipQ8VC66 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ssx2ipQ8VC66 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ssx2ipQ8VC66 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.37■■□□□ 1.17
Ssx2ipQ8VC66 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ssx2ipQ8VC66 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Ssx2ipQ8VC66 Gm16437-201ENSMUST00000025669 507 ntBASIC22.37■■□□□ 1.17
Ssx2ipQ8VC66 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ssx2ipQ8VC66 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.36■■□□□ 1.17
Ssx2ipQ8VC66 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ssx2ipQ8VC66 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ssx2ipQ8VC66 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ssx2ipQ8VC66 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ssx2ipQ8VC66 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ssx2ipQ8VC66 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ssx2ipQ8VC66 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ssx2ipQ8VC66 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.35■■□□□ 1.17
Ssx2ipQ8VC66 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ssx2ipQ8VC66 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ssx2ipQ8VC66 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ssx2ipQ8VC66 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ssx2ipQ8VC66 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ssx2ipQ8VC66 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Ssx2ipQ8VC66 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ssx2ipQ8VC66 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ssx2ipQ8VC66 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ssx2ipQ8VC66 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ssx2ipQ8VC66 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Ssx2ipQ8VC66 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ssx2ipQ8VC66 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ssx2ipQ8VC66 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.33■■□□□ 1.17
Ssx2ipQ8VC66 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ssx2ipQ8VC66 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Ssx2ipQ8VC66 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ssx2ipQ8VC66 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ssx2ipQ8VC66 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Ssx2ipQ8VC66 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ssx2ipQ8VC66 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Ssx2ipQ8VC66 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ssx2ipQ8VC66 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ssx2ipQ8VC66 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.32■■□□□ 1.16
Ssx2ipQ8VC66 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ssx2ipQ8VC66 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ssx2ipQ8VC66 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ssx2ipQ8VC66 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ssx2ipQ8VC66 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ssx2ipQ8VC66 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.31■■□□□ 1.16
Ssx2ipQ8VC66 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ssx2ipQ8VC66 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.31■■□□□ 1.16
Ssx2ipQ8VC66 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms