Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Cd109Q8R422 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC32.11■■■□□ 2.73
Cd109Q8R422 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Cd109Q8R422 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Cd109Q8R422 Rps24-207ENSMUST00000224568 714 ntBASIC32.1■■■□□ 2.73
Cd109Q8R422 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Cd109Q8R422 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Cd109Q8R422 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Cd109Q8R422 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Cd109Q8R422 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Cd109Q8R422 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Cd109Q8R422 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Cd109Q8R422 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC32.09■■■□□ 2.73
Cd109Q8R422 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
Cd109Q8R422 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC32.08■■■□□ 2.73
Cd109Q8R422 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Cd109Q8R422 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC32.07■■■□□ 2.72
Cd109Q8R422 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Cd109Q8R422 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Cd109Q8R422 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Cd109Q8R422 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
Cd109Q8R422 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Cd109Q8R422 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
Cd109Q8R422 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Cd109Q8R422 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Cd109Q8R422 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cd109Q8R422 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cd109Q8R422 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC32.05■■■□□ 2.72
Cd109Q8R422 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cd109Q8R422 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Cd109Q8R422 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cd109Q8R422 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
Cd109Q8R422 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cd109Q8R422 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cd109Q8R422 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
Cd109Q8R422 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Cd109Q8R422 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC32.03■■■□□ 2.72
Cd109Q8R422 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Cd109Q8R422 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Cd109Q8R422 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC32.03■■■□□ 2.72
Cd109Q8R422 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Cd109Q8R422 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC32.02■■■□□ 2.72
Cd109Q8R422 Gm45102-201ENSMUST00000207427 857 ntBASIC32.02■■■□□ 2.72
Cd109Q8R422 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Cd109Q8R422 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Cd109Q8R422 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Cd109Q8R422 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
Cd109Q8R422 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Cd109Q8R422 Gm18755-201ENSMUST00000218030 1099 ntBASIC32■■■□□ 2.71
Cd109Q8R422 Gm14117-201ENSMUST00000122417 843 ntBASIC32■■■□□ 2.71
Cd109Q8R422 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cd109Q8R422 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cd109Q8R422 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cd109Q8R422 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cd109Q8R422 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
Cd109Q8R422 Gm42501-201ENSMUST00000200220 1026 ntBASIC31.99■■■□□ 2.71
Cd109Q8R422 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
Cd109Q8R422 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC31.98■■■□□ 2.71
Cd109Q8R422 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cd109Q8R422 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
Cd109Q8R422 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cd109Q8R422 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cd109Q8R422 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cd109Q8R422 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
Cd109Q8R422 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cd109Q8R422 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cd109Q8R422 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Cd109Q8R422 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC31.95■■■□□ 2.71
Cd109Q8R422 Gm9959-201ENSMUST00000068277 390 ntBASIC31.95■■■□□ 2.71
Cd109Q8R422 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Cd109Q8R422 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
Cd109Q8R422 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC31.94■■■□□ 2.7
Cd109Q8R422 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC31.94■■■□□ 2.7
Cd109Q8R422 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Cd109Q8R422 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Cd109Q8R422 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Cd109Q8R422 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cd109Q8R422 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC31.92■■■□□ 2.7
Cd109Q8R422 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cd109Q8R422 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cd109Q8R422 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cd109Q8R422 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Cd109Q8R422 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Cd109Q8R422 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
Cd109Q8R422 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cd109Q8R422 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Cd109Q8R422 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Cd109Q8R422 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC31.9■■■□□ 2.7
Cd109Q8R422 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Cd109Q8R422 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Cd109Q8R422 Gm10232-201ENSMUST00000089221 720 ntBASIC31.9■■■□□ 2.7
Cd109Q8R422 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Cd109Q8R422 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Cd109Q8R422 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Cd109Q8R422 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Cd109Q8R422 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
Cd109Q8R422 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cd109Q8R422 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Cd109Q8R422 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
Cd109Q8R422 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC31.86■■■□□ 2.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms