Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Tm6sf2Q8R1J1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Tm6sf2Q8R1J1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf2Q8R1J1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.78■□□□□ 0.92
Tm6sf2Q8R1J1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tm6sf2Q8R1J1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.77■□□□□ 0.92
Tm6sf2Q8R1J1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Tm6sf2Q8R1J1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tm6sf2Q8R1J1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf2Q8R1J1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.76■□□□□ 0.91
Tm6sf2Q8R1J1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf2Q8R1J1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf2Q8R1J1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf2Q8R1J1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf2Q8R1J1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf2Q8R1J1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf2Q8R1J1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf2Q8R1J1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf2Q8R1J1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf2Q8R1J1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf2Q8R1J1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tm6sf2Q8R1J1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.74■□□□□ 0.91
Tm6sf2Q8R1J1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tm6sf2Q8R1J1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Tm6sf2Q8R1J1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tm6sf2Q8R1J1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tm6sf2Q8R1J1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tm6sf2Q8R1J1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tm6sf2Q8R1J1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Tm6sf2Q8R1J1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tm6sf2Q8R1J1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tm6sf2Q8R1J1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tm6sf2Q8R1J1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tm6sf2Q8R1J1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tm6sf2Q8R1J1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tm6sf2Q8R1J1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tm6sf2Q8R1J1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.71■□□□□ 0.91
Tm6sf2Q8R1J1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tm6sf2Q8R1J1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Tm6sf2Q8R1J1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tm6sf2Q8R1J1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tm6sf2Q8R1J1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tm6sf2Q8R1J1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tm6sf2Q8R1J1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tm6sf2Q8R1J1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tm6sf2Q8R1J1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tm6sf2Q8R1J1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tm6sf2Q8R1J1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tm6sf2Q8R1J1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tm6sf2Q8R1J1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tm6sf2Q8R1J1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tm6sf2Q8R1J1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tm6sf2Q8R1J1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tm6sf2Q8R1J1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tm6sf2Q8R1J1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.69■□□□□ 0.9
Tm6sf2Q8R1J1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tm6sf2Q8R1J1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf2Q8R1J1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tm6sf2Q8R1J1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf2Q8R1J1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf2Q8R1J1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf2Q8R1J1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf2Q8R1J1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tm6sf2Q8R1J1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf2Q8R1J1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf2Q8R1J1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tm6sf2Q8R1J1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf2Q8R1J1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf2Q8R1J1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tm6sf2Q8R1J1 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.66■□□□□ 0.9
Tm6sf2Q8R1J1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf2Q8R1J1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf2Q8R1J1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf2Q8R1J1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf2Q8R1J1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf2Q8R1J1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf2Q8R1J1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tm6sf2Q8R1J1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tm6sf2Q8R1J1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.65■□□□□ 0.9
Tm6sf2Q8R1J1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tm6sf2Q8R1J1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tm6sf2Q8R1J1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tm6sf2Q8R1J1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf2Q8R1J1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf2Q8R1J1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.64■□□□□ 0.89
Tm6sf2Q8R1J1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf2Q8R1J1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.63■□□□□ 0.89
Tm6sf2Q8R1J1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.63■□□□□ 0.89
Tm6sf2Q8R1J1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf2Q8R1J1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf2Q8R1J1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf2Q8R1J1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf2Q8R1J1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf2Q8R1J1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tm6sf2Q8R1J1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.62■□□□□ 0.89
Tm6sf2Q8R1J1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf2Q8R1J1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf2Q8R1J1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf2Q8R1J1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf2Q8R1J1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms