Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpp40Q8R1F9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rpp40Q8R1F9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rpp40Q8R1F9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Rpp40Q8R1F9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rpp40Q8R1F9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Rpp40Q8R1F9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpp40Q8R1F9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpp40Q8R1F9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rpp40Q8R1F9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Rpp40Q8R1F9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rpp40Q8R1F9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Rpp40Q8R1F9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rpp40Q8R1F9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Rpp40Q8R1F9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Rpp40Q8R1F9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rpp40Q8R1F9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpp40Q8R1F9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpp40Q8R1F9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpp40Q8R1F9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rpp40Q8R1F9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpp40Q8R1F9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpp40Q8R1F9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpp40Q8R1F9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Rpp40Q8R1F9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpp40Q8R1F9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpp40Q8R1F9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rpp40Q8R1F9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Rpp40Q8R1F9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpp40Q8R1F9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Rpp40Q8R1F9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rpp40Q8R1F9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rpp40Q8R1F9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rpp40Q8R1F9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.8■■□□□ 1.4
Rpp40Q8R1F9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rpp40Q8R1F9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rpp40Q8R1F9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rpp40Q8R1F9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rpp40Q8R1F9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rpp40Q8R1F9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rpp40Q8R1F9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rpp40Q8R1F9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
Rpp40Q8R1F9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rpp40Q8R1F9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rpp40Q8R1F9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.78■■□□□ 1.4
Rpp40Q8R1F9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rpp40Q8R1F9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rpp40Q8R1F9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Rpp40Q8R1F9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rpp40Q8R1F9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rpp40Q8R1F9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rpp40Q8R1F9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rpp40Q8R1F9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rpp40Q8R1F9 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.77■■□□□ 1.4
Rpp40Q8R1F9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rpp40Q8R1F9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rpp40Q8R1F9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rpp40Q8R1F9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rpp40Q8R1F9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpp40Q8R1F9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpp40Q8R1F9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rpp40Q8R1F9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpp40Q8R1F9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rpp40Q8R1F9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Rpp40Q8R1F9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.73■■□□□ 1.39
Rpp40Q8R1F9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpp40Q8R1F9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpp40Q8R1F9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpp40Q8R1F9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpp40Q8R1F9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpp40Q8R1F9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpp40Q8R1F9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.72■■□□□ 1.39
Rpp40Q8R1F9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Rpp40Q8R1F9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpp40Q8R1F9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpp40Q8R1F9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpp40Q8R1F9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.72■■□□□ 1.39
Rpp40Q8R1F9 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.72■■□□□ 1.39
Rpp40Q8R1F9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpp40Q8R1F9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpp40Q8R1F9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Rpp40Q8R1F9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Rpp40Q8R1F9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Rpp40Q8R1F9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Rpp40Q8R1F9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rpp40Q8R1F9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.7■■□□□ 1.38
Rpp40Q8R1F9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpp40Q8R1F9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.7■■□□□ 1.38
Rpp40Q8R1F9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.7■■□□□ 1.38
Rpp40Q8R1F9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.7■■□□□ 1.38
Rpp40Q8R1F9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpp40Q8R1F9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpp40Q8R1F9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpp40Q8R1F9 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.69■■□□□ 1.38
Rpp40Q8R1F9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpp40Q8R1F9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpp40Q8R1F9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpp40Q8R1F9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpp40Q8R1F9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.68■■□□□ 1.38
Rpp40Q8R1F9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms