Protein–RNA interactions for Protein: Q8QZR0

Tram1l1, Translocating chain-associated membrane protein 1-like 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1l1Q8QZR0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tram1l1Q8QZR0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tram1l1Q8QZR0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tram1l1Q8QZR0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tram1l1Q8QZR0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tram1l1Q8QZR0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.36■■□□□ 1.17
Tram1l1Q8QZR0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Tram1l1Q8QZR0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Tram1l1Q8QZR0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Tram1l1Q8QZR0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tram1l1Q8QZR0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Tram1l1Q8QZR0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.35■■□□□ 1.17
Tram1l1Q8QZR0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.35■■□□□ 1.17
Tram1l1Q8QZR0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tram1l1Q8QZR0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tram1l1Q8QZR0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tram1l1Q8QZR0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tram1l1Q8QZR0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tram1l1Q8QZR0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.34■■□□□ 1.17
Tram1l1Q8QZR0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tram1l1Q8QZR0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.34■■□□□ 1.17
Tram1l1Q8QZR0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.34■■□□□ 1.17
Tram1l1Q8QZR0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tram1l1Q8QZR0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.33■■□□□ 1.17
Tram1l1Q8QZR0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Tram1l1Q8QZR0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Tram1l1Q8QZR0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tram1l1Q8QZR0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tram1l1Q8QZR0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tram1l1Q8QZR0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Tram1l1Q8QZR0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tram1l1Q8QZR0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Tram1l1Q8QZR0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.31■■□□□ 1.16
Tram1l1Q8QZR0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Tram1l1Q8QZR0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tram1l1Q8QZR0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tram1l1Q8QZR0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tram1l1Q8QZR0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tram1l1Q8QZR0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tram1l1Q8QZR0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tram1l1Q8QZR0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tram1l1Q8QZR0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.3■■□□□ 1.16
Tram1l1Q8QZR0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tram1l1Q8QZR0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Tram1l1Q8QZR0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tram1l1Q8QZR0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tram1l1Q8QZR0 Gm15820-201ENSMUST00000201566 728 ntBASIC22.28■■□□□ 1.16
Tram1l1Q8QZR0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.28■■□□□ 1.16
Tram1l1Q8QZR0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.28■■□□□ 1.16
Tram1l1Q8QZR0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tram1l1Q8QZR0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tram1l1Q8QZR0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Tram1l1Q8QZR0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.26■■□□□ 1.15
Tram1l1Q8QZR0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.26■■□□□ 1.15
Tram1l1Q8QZR0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tram1l1Q8QZR0 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.26■■□□□ 1.15
Tram1l1Q8QZR0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.25■■□□□ 1.15
Tram1l1Q8QZR0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Tram1l1Q8QZR0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Tram1l1Q8QZR0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tram1l1Q8QZR0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Tram1l1Q8QZR0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tram1l1Q8QZR0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Tram1l1Q8QZR0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tram1l1Q8QZR0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tram1l1Q8QZR0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Tram1l1Q8QZR0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tram1l1Q8QZR0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Tram1l1Q8QZR0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Tram1l1Q8QZR0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Tram1l1Q8QZR0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.23■■□□□ 1.15
Tram1l1Q8QZR0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
Tram1l1Q8QZR0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Tram1l1Q8QZR0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Tram1l1Q8QZR0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tram1l1Q8QZR0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tram1l1Q8QZR0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tram1l1Q8QZR0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tram1l1Q8QZR0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tram1l1Q8QZR0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tram1l1Q8QZR0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.21■■□□□ 1.15
Tram1l1Q8QZR0 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.21■■□□□ 1.15
Tram1l1Q8QZR0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.21■■□□□ 1.15
Tram1l1Q8QZR0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tram1l1Q8QZR0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tram1l1Q8QZR0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Tram1l1Q8QZR0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tram1l1Q8QZR0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tram1l1Q8QZR0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tram1l1Q8QZR0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Tram1l1Q8QZR0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tram1l1Q8QZR0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Tram1l1Q8QZR0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.19■■□□□ 1.14
Tram1l1Q8QZR0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Tram1l1Q8QZR0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Tram1l1Q8QZR0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tram1l1Q8QZR0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tram1l1Q8QZR0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Tram1l1Q8QZR0 Gm22567-201ENSMUST00000175542 342 ntBASIC22.18■■□□□ 1.14
Tram1l1Q8QZR0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms