Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC27.87■■■□□ 2.05
Col23a1Q8K4G2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Col23a1Q8K4G2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Col23a1Q8K4G2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC27.87■■■□□ 2.05
Col23a1Q8K4G2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Col23a1Q8K4G2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Col23a1Q8K4G2 Gm16464-201ENSMUST00000117815 1095 ntBASIC27.86■■■□□ 2.05
Col23a1Q8K4G2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
Col23a1Q8K4G2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Col23a1Q8K4G2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Col23a1Q8K4G2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Col23a1Q8K4G2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Col23a1Q8K4G2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Col23a1Q8K4G2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC27.85■■■□□ 2.05
Col23a1Q8K4G2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Col23a1Q8K4G2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Col23a1Q8K4G2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Col23a1Q8K4G2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Col23a1Q8K4G2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Col23a1Q8K4G2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Col23a1Q8K4G2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Col23a1Q8K4G2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC27.83■■■□□ 2.05
Col23a1Q8K4G2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Col23a1Q8K4G2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col23a1Q8K4G2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col23a1Q8K4G2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col23a1Q8K4G2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col23a1Q8K4G2 Gm22238-201ENSMUST00000175222 88 ntBASIC27.8■■■□□ 2.04
Col23a1Q8K4G2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Col23a1Q8K4G2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Col23a1Q8K4G2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Col23a1Q8K4G2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Col23a1Q8K4G2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC27.79■■■□□ 2.04
Col23a1Q8K4G2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Col23a1Q8K4G2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Col23a1Q8K4G2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Col23a1Q8K4G2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Col23a1Q8K4G2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC27.76■■■□□ 2.04
Col23a1Q8K4G2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
Col23a1Q8K4G2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC27.76■■■□□ 2.03
Col23a1Q8K4G2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Col23a1Q8K4G2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Col23a1Q8K4G2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Col23a1Q8K4G2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC27.75■■■□□ 2.03
Col23a1Q8K4G2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Col23a1Q8K4G2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Col23a1Q8K4G2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Col23a1Q8K4G2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC27.74■■■□□ 2.03
Col23a1Q8K4G2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Col23a1Q8K4G2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC27.74■■■□□ 2.03
Col23a1Q8K4G2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Col23a1Q8K4G2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col23a1Q8K4G2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Col23a1Q8K4G2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC27.72■■■□□ 2.03
Col23a1Q8K4G2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col23a1Q8K4G2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col23a1Q8K4G2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC27.71■■■□□ 2.03
Col23a1Q8K4G2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC27.71■■■□□ 2.03
Col23a1Q8K4G2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.7■■■□□ 2.03
Col23a1Q8K4G2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC27.7■■■□□ 2.02
Col23a1Q8K4G2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC27.7■■■□□ 2.02
Col23a1Q8K4G2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Col23a1Q8K4G2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Col23a1Q8K4G2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Col23a1Q8K4G2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Col23a1Q8K4G2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Col23a1Q8K4G2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Col23a1Q8K4G2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.68■■■□□ 2.02
Col23a1Q8K4G2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC27.68■■■□□ 2.02
Col23a1Q8K4G2 Appbp2os-202ENSMUST00000206972 447 ntBASIC27.68■■■□□ 2.02
Col23a1Q8K4G2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Col23a1Q8K4G2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Col23a1Q8K4G2 Slc35b2-207ENSMUST00000226086 850 ntBASIC27.67■■■□□ 2.02
Col23a1Q8K4G2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Col23a1Q8K4G2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Col23a1Q8K4G2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC27.66■■■□□ 2.02
Col23a1Q8K4G2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Col23a1Q8K4G2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
Col23a1Q8K4G2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC27.65■■■□□ 2.02
Col23a1Q8K4G2 AC140930.3-201ENSMUST00000222935 274 ntBASIC27.65■■■□□ 2.02
Col23a1Q8K4G2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Col23a1Q8K4G2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Col23a1Q8K4G2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
Col23a1Q8K4G2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC27.64■■■□□ 2.02
Col23a1Q8K4G2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC27.63■■■□□ 2.01
Col23a1Q8K4G2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Col23a1Q8K4G2 Gm12922-201ENSMUST00000120626 809 ntBASIC27.62■■■□□ 2.01
Col23a1Q8K4G2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC27.62■■■□□ 2.01
Col23a1Q8K4G2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
Col23a1Q8K4G2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Col23a1Q8K4G2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Col23a1Q8K4G2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
Col23a1Q8K4G2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC27.6■■■□□ 2.01
Col23a1Q8K4G2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Col23a1Q8K4G2 Gm40881-201ENSMUST00000223397 166 ntBASIC27.59■■■□□ 2.01
Col23a1Q8K4G2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Col23a1Q8K4G2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC27.58■■■□□ 2.01
Col23a1Q8K4G2 Gm27454-201ENSMUST00000185090 204 ntBASIC27.58■■■□□ 2.01
Col23a1Q8K4G2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Col23a1Q8K4G2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms