Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rdh1Q8CGV4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rdh1Q8CGV4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.63■■□□□ 1.05
Rdh1Q8CGV4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rdh1Q8CGV4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rdh1Q8CGV4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.62■■□□□ 1.05
Rdh1Q8CGV4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rdh1Q8CGV4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rdh1Q8CGV4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Rdh1Q8CGV4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rdh1Q8CGV4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rdh1Q8CGV4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rdh1Q8CGV4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rdh1Q8CGV4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rdh1Q8CGV4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rdh1Q8CGV4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rdh1Q8CGV4 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.59■■□□□ 1.05
Rdh1Q8CGV4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rdh1Q8CGV4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rdh1Q8CGV4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rdh1Q8CGV4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rdh1Q8CGV4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.58■■□□□ 1.05
Rdh1Q8CGV4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Rdh1Q8CGV4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rdh1Q8CGV4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rdh1Q8CGV4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rdh1Q8CGV4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.57■■□□□ 1.04
Rdh1Q8CGV4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rdh1Q8CGV4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rdh1Q8CGV4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rdh1Q8CGV4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rdh1Q8CGV4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Rdh1Q8CGV4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rdh1Q8CGV4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 Gm5812-201ENSMUST00000061073 957 ntBASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Rdh1Q8CGV4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rdh1Q8CGV4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rdh1Q8CGV4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rdh1Q8CGV4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Rdh1Q8CGV4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.55■■□□□ 1.04
Rdh1Q8CGV4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rdh1Q8CGV4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rdh1Q8CGV4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rdh1Q8CGV4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rdh1Q8CGV4 Gm13238-201ENSMUST00000117655 780 ntBASIC21.54■■□□□ 1.04
Rdh1Q8CGV4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.54■■□□□ 1.04
Rdh1Q8CGV4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rdh1Q8CGV4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.53■■□□□ 1.04
Rdh1Q8CGV4 Gm45444-201ENSMUST00000211394 898 ntBASIC21.53■■□□□ 1.04
Rdh1Q8CGV4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rdh1Q8CGV4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
Rdh1Q8CGV4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Rdh1Q8CGV4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rdh1Q8CGV4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.52■■□□□ 1.04
Rdh1Q8CGV4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.52■■□□□ 1.04
Rdh1Q8CGV4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rdh1Q8CGV4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rdh1Q8CGV4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rdh1Q8CGV4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rdh1Q8CGV4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rdh1Q8CGV4 Gm43566-201ENSMUST00000196851 808 ntBASIC21.51■■□□□ 1.03
Rdh1Q8CGV4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rdh1Q8CGV4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rdh1Q8CGV4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rdh1Q8CGV4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rdh1Q8CGV4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rdh1Q8CGV4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rdh1Q8CGV4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rdh1Q8CGV4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rdh1Q8CGV4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.49■■□□□ 1.03
Rdh1Q8CGV4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rdh1Q8CGV4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.49■■□□□ 1.03
Rdh1Q8CGV4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rdh1Q8CGV4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rdh1Q8CGV4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rdh1Q8CGV4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rdh1Q8CGV4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.48■■□□□ 1.03
Rdh1Q8CGV4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rdh1Q8CGV4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rdh1Q8CGV4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rdh1Q8CGV4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Rdh1Q8CGV4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rdh1Q8CGV4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.47■■□□□ 1.03
Rdh1Q8CGV4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.47■■□□□ 1.03
Rdh1Q8CGV4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rdh1Q8CGV4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rdh1Q8CGV4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.46■■□□□ 1.03
Rdh1Q8CGV4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rdh1Q8CGV4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rdh1Q8CGV4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rdh1Q8CGV4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms