Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb7Q8CDY9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Pcdhb7Q8CDY9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb7Q8CDY9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Pcdhb7Q8CDY9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb7Q8CDY9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb7Q8CDY9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.06■■□□□ 1.12
Pcdhb7Q8CDY9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb7Q8CDY9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb7Q8CDY9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Pcdhb7Q8CDY9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb7Q8CDY9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb7Q8CDY9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb7Q8CDY9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb7Q8CDY9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Pcdhb7Q8CDY9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb7Q8CDY9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb7Q8CDY9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb7Q8CDY9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb7Q8CDY9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb7Q8CDY9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Pcdhb7Q8CDY9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.02■■□□□ 1.12
Pcdhb7Q8CDY9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb7Q8CDY9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb7Q8CDY9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb7Q8CDY9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb7Q8CDY9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdhb7Q8CDY9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdhb7Q8CDY9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdhb7Q8CDY9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb7Q8CDY9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb7Q8CDY9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb7Q8CDY9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb7Q8CDY9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb7Q8CDY9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb7Q8CDY9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdhb7Q8CDY9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb7Q8CDY9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Pcdhb7Q8CDY9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb7Q8CDY9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22■■□□□ 1.11
Pcdhb7Q8CDY9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb7Q8CDY9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb7Q8CDY9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb7Q8CDY9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb7Q8CDY9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb7Q8CDY9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb7Q8CDY9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb7Q8CDY9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb7Q8CDY9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb7Q8CDY9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb7Q8CDY9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.98■■□□□ 1.11
Pcdhb7Q8CDY9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.98■■□□□ 1.11
Pcdhb7Q8CDY9 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.98■■□□□ 1.11
Pcdhb7Q8CDY9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb7Q8CDY9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhb7Q8CDY9 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.98■■□□□ 1.11
Pcdhb7Q8CDY9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.97■■□□□ 1.11
Pcdhb7Q8CDY9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb7Q8CDY9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pcdhb7Q8CDY9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Pcdhb7Q8CDY9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.96■■□□□ 1.11
Pcdhb7Q8CDY9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.96■■□□□ 1.11
Pcdhb7Q8CDY9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb7Q8CDY9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb7Q8CDY9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb7Q8CDY9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb7Q8CDY9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb7Q8CDY9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb7Q8CDY9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb7Q8CDY9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Pcdhb7Q8CDY9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb7Q8CDY9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb7Q8CDY9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb7Q8CDY9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb7Q8CDY9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb7Q8CDY9 Scarna2-201ENSMUST00000157560 414 ntBASIC21.94■■□□□ 1.1
Pcdhb7Q8CDY9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Pcdhb7Q8CDY9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb7Q8CDY9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb7Q8CDY9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb7Q8CDY9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb7Q8CDY9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.93■■□□□ 1.1
Pcdhb7Q8CDY9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.93■■□□□ 1.1
Pcdhb7Q8CDY9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb7Q8CDY9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb7Q8CDY9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb7Q8CDY9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdhb7Q8CDY9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb7Q8CDY9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Pcdhb7Q8CDY9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb7Q8CDY9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb7Q8CDY9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb7Q8CDY9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdhb7Q8CDY9 Gm16437-201ENSMUST00000025669 507 ntBASIC21.91■■□□□ 1.1
Pcdhb7Q8CDY9 Gm9806-201ENSMUST00000051080 552 ntBASIC21.91■■□□□ 1.1
Pcdhb7Q8CDY9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb7Q8CDY9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb7Q8CDY9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb7Q8CDY9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb7Q8CDY9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms