Protein–RNA interactions for Protein: Q8CA09

Gm4894, Predicted gene 4894, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4894Q8CA09 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.63■□□□□ 0.41
Gm4894Q8CA09 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.63■□□□□ 0.41
Gm4894Q8CA09 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm4894Q8CA09 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm4894Q8CA09 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm4894Q8CA09 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm4894Q8CA09 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm4894Q8CA09 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm4894Q8CA09 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm4894Q8CA09 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm4894Q8CA09 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm4894Q8CA09 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm4894Q8CA09 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm4894Q8CA09 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm4894Q8CA09 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm4894Q8CA09 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Gm4894Q8CA09 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm4894Q8CA09 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm4894Q8CA09 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm4894Q8CA09 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm4894Q8CA09 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm4894Q8CA09 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.6■□□□□ 0.41
Gm4894Q8CA09 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.6■□□□□ 0.41
Gm4894Q8CA09 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm4894Q8CA09 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gm4894Q8CA09 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.6■□□□□ 0.41
Gm4894Q8CA09 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm4894Q8CA09 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm4894Q8CA09 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm4894Q8CA09 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm4894Q8CA09 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Gm4894Q8CA09 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm4894Q8CA09 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm4894Q8CA09 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.59■□□□□ 0.41
Gm4894Q8CA09 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm4894Q8CA09 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm4894Q8CA09 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm4894Q8CA09 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm4894Q8CA09 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm4894Q8CA09 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm4894Q8CA09 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm4894Q8CA09 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm4894Q8CA09 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm4894Q8CA09 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm4894Q8CA09 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm4894Q8CA09 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm4894Q8CA09 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm4894Q8CA09 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm4894Q8CA09 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm4894Q8CA09 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm4894Q8CA09 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm4894Q8CA09 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm4894Q8CA09 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm4894Q8CA09 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.56■□□□□ 0.4
Gm4894Q8CA09 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.56■□□□□ 0.4
Gm4894Q8CA09 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm4894Q8CA09 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm4894Q8CA09 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm4894Q8CA09 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm4894Q8CA09 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm4894Q8CA09 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm4894Q8CA09 Mir3960-201ENSMUST00000198213 73 ntBASIC17.55■□□□□ 0.4
Gm4894Q8CA09 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm4894Q8CA09 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm4894Q8CA09 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm4894Q8CA09 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4894Q8CA09 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm4894Q8CA09 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4894Q8CA09 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm4894Q8CA09 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Gm4894Q8CA09 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4894Q8CA09 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm4894Q8CA09 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm4894Q8CA09 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4894Q8CA09 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4894Q8CA09 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm4894Q8CA09 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4894Q8CA09 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4894Q8CA09 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm4894Q8CA09 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4894Q8CA09 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4894Q8CA09 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4894Q8CA09 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.53■□□□□ 0.4
Gm4894Q8CA09 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gm4894Q8CA09 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Gm4894Q8CA09 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm4894Q8CA09 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Gm4894Q8CA09 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gm4894Q8CA09 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.52■□□□□ 0.4
Gm4894Q8CA09 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm4894Q8CA09 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm4894Q8CA09 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm4894Q8CA09 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm4894Q8CA09 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm4894Q8CA09 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm4894Q8CA09 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.5■□□□□ 0.39
Gm4894Q8CA09 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4894Q8CA09 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm4894Q8CA09 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4894Q8CA09 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms