Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.42■■□□□ 1.18
Rfx6Q8C7R7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.42■■□□□ 1.18
Rfx6Q8C7R7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
Rfx6Q8C7R7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfx6Q8C7R7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfx6Q8C7R7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Rfx6Q8C7R7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rfx6Q8C7R7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rfx6Q8C7R7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.41■■□□□ 1.18
Rfx6Q8C7R7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfx6Q8C7R7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfx6Q8C7R7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfx6Q8C7R7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Rfx6Q8C7R7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfx6Q8C7R7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Rfx6Q8C7R7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.39■■□□□ 1.17
Rfx6Q8C7R7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfx6Q8C7R7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfx6Q8C7R7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.38■■□□□ 1.17
Rfx6Q8C7R7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.38■■□□□ 1.17
Rfx6Q8C7R7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Rfx6Q8C7R7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Rfx6Q8C7R7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.37■■□□□ 1.17
Rfx6Q8C7R7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfx6Q8C7R7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.36■■□□□ 1.17
Rfx6Q8C7R7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Rfx6Q8C7R7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfx6Q8C7R7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfx6Q8C7R7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfx6Q8C7R7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfx6Q8C7R7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Rfx6Q8C7R7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rfx6Q8C7R7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.35■■□□□ 1.17
Rfx6Q8C7R7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfx6Q8C7R7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rfx6Q8C7R7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rfx6Q8C7R7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rfx6Q8C7R7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfx6Q8C7R7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rfx6Q8C7R7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rfx6Q8C7R7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfx6Q8C7R7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfx6Q8C7R7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfx6Q8C7R7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfx6Q8C7R7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Rfx6Q8C7R7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfx6Q8C7R7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfx6Q8C7R7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfx6Q8C7R7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Rfx6Q8C7R7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.32■■□□□ 1.16
Rfx6Q8C7R7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.32■■□□□ 1.16
Rfx6Q8C7R7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rfx6Q8C7R7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rfx6Q8C7R7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Rfx6Q8C7R7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Rfx6Q8C7R7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rfx6Q8C7R7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.31■■□□□ 1.16
Rfx6Q8C7R7 Gm9812-201ENSMUST00000061934 968 ntBASIC22.3■■□□□ 1.16
Rfx6Q8C7R7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rfx6Q8C7R7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rfx6Q8C7R7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rfx6Q8C7R7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rfx6Q8C7R7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rfx6Q8C7R7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rfx6Q8C7R7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.29■■□□□ 1.16
Rfx6Q8C7R7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Rfx6Q8C7R7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rfx6Q8C7R7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rfx6Q8C7R7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rfx6Q8C7R7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rfx6Q8C7R7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.28■■□□□ 1.16
Rfx6Q8C7R7 Mir3960-201ENSMUST00000198213 73 ntBASIC22.28■■□□□ 1.16
Rfx6Q8C7R7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rfx6Q8C7R7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Rfx6Q8C7R7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rfx6Q8C7R7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Rfx6Q8C7R7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.27■■□□□ 1.16
Rfx6Q8C7R7 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.27■■□□□ 1.16
Rfx6Q8C7R7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rfx6Q8C7R7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rfx6Q8C7R7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rfx6Q8C7R7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.25■■□□□ 1.15
Rfx6Q8C7R7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rfx6Q8C7R7 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.25■■□□□ 1.15
Rfx6Q8C7R7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rfx6Q8C7R7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rfx6Q8C7R7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.24■■□□□ 1.15
Rfx6Q8C7R7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Rfx6Q8C7R7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms