Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Cps1Q8C196 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Cps1Q8C196 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Cps1Q8C196 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
Cps1Q8C196 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Cps1Q8C196 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Cps1Q8C196 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC30.85■■■□□ 2.53
Cps1Q8C196 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC30.84■■■□□ 2.53
Cps1Q8C196 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Cps1Q8C196 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.84■■■□□ 2.53
Cps1Q8C196 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
Cps1Q8C196 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cps1Q8C196 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC30.83■■■□□ 2.53
Cps1Q8C196 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC30.83■■■□□ 2.53
Cps1Q8C196 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cps1Q8C196 AC164433.2-201ENSMUST00000226346 1701 ntBASIC30.83■■■□□ 2.53
Cps1Q8C196 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cps1Q8C196 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC30.83■■■□□ 2.53
Cps1Q8C196 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cps1Q8C196 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cps1Q8C196 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cps1Q8C196 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Cps1Q8C196 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC30.82■■■□□ 2.52
Cps1Q8C196 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cps1Q8C196 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cps1Q8C196 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC30.81■■■□□ 2.52
Cps1Q8C196 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cps1Q8C196 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Cps1Q8C196 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Cps1Q8C196 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC30.8■■■□□ 2.52
Cps1Q8C196 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Cps1Q8C196 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
Cps1Q8C196 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Cps1Q8C196 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC30.79■■■□□ 2.52
Cps1Q8C196 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Cps1Q8C196 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Cps1Q8C196 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC30.78■■■□□ 2.52
Cps1Q8C196 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Cps1Q8C196 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Cps1Q8C196 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC30.77■■■□□ 2.52
Cps1Q8C196 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC30.77■■■□□ 2.52
Cps1Q8C196 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Cps1Q8C196 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC30.76■■■□□ 2.51
Cps1Q8C196 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cps1Q8C196 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Cps1Q8C196 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Cps1Q8C196 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC30.75■■■□□ 2.51
Cps1Q8C196 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cps1Q8C196 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC30.74■■■□□ 2.51
Cps1Q8C196 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cps1Q8C196 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Cps1Q8C196 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cps1Q8C196 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cps1Q8C196 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cps1Q8C196 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cps1Q8C196 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
Cps1Q8C196 Gm16464-201ENSMUST00000117815 1095 ntBASIC30.71■■■□□ 2.51
Cps1Q8C196 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Cps1Q8C196 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Cps1Q8C196 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Cps1Q8C196 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Cps1Q8C196 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC30.69■■■□□ 2.5
Cps1Q8C196 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Cps1Q8C196 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Cps1Q8C196 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cps1Q8C196 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC30.69■■■□□ 2.5
Cps1Q8C196 Etf1-202ENSMUST00000180351 108 ntBASIC30.69■■■□□ 2.5
Cps1Q8C196 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
Cps1Q8C196 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.68■■■□□ 2.5
Cps1Q8C196 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC30.67■■■□□ 2.5
Cps1Q8C196 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cps1Q8C196 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Cps1Q8C196 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cps1Q8C196 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Cps1Q8C196 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC30.64■■■□□ 2.5
Cps1Q8C196 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cps1Q8C196 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cps1Q8C196 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cps1Q8C196 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
Cps1Q8C196 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Cps1Q8C196 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Cps1Q8C196 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Cps1Q8C196 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cps1Q8C196 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Cps1Q8C196 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Cps1Q8C196 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cps1Q8C196 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC30.63■■■□□ 2.49
Cps1Q8C196 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Cps1Q8C196 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cps1Q8C196 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC30.62■■■□□ 2.49
Cps1Q8C196 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cps1Q8C196 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Cps1Q8C196 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC30.6■■■□□ 2.49
Cps1Q8C196 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.6■■■□□ 2.49
Cps1Q8C196 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cps1Q8C196 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cps1Q8C196 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cps1Q8C196 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cps1Q8C196 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC30.59■■■□□ 2.49
Cps1Q8C196 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms