Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Nek11Q8C0Q4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.39■■□□□ 1.82
Nek11Q8C0Q4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Nek11Q8C0Q4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Nek11Q8C0Q4 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.38■■□□□ 1.81
Nek11Q8C0Q4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Nek11Q8C0Q4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Gm12366-201ENSMUST00000121722 873 ntBASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Gm5786-201ENSMUST00000085368 882 ntBASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.33■■□□□ 1.81
Nek11Q8C0Q4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nek11Q8C0Q4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Nek11Q8C0Q4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Nek11Q8C0Q4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Nek11Q8C0Q4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Gm7332-201ENSMUST00000118351 454 ntBASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.3■■□□□ 1.8
Nek11Q8C0Q4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nek11Q8C0Q4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.3■■□□□ 1.8
Nek11Q8C0Q4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.3■■□□□ 1.8
Nek11Q8C0Q4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.3■■□□□ 1.8
Nek11Q8C0Q4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nek11Q8C0Q4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nek11Q8C0Q4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nek11Q8C0Q4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nek11Q8C0Q4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nek11Q8C0Q4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nek11Q8C0Q4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Nek11Q8C0Q4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nek11Q8C0Q4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nek11Q8C0Q4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nek11Q8C0Q4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nek11Q8C0Q4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nek11Q8C0Q4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nek11Q8C0Q4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.25■■□□□ 1.79
Nek11Q8C0Q4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nek11Q8C0Q4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Nek11Q8C0Q4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nek11Q8C0Q4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Nek11Q8C0Q4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nek11Q8C0Q4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nek11Q8C0Q4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nek11Q8C0Q4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nek11Q8C0Q4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.23■■□□□ 1.79
Nek11Q8C0Q4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Nek11Q8C0Q4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nek11Q8C0Q4 Cap2-205ENSMUST00000225824 1634 ntBASIC26.22■■□□□ 1.79
Nek11Q8C0Q4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nek11Q8C0Q4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Nek11Q8C0Q4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nek11Q8C0Q4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Nek11Q8C0Q4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nek11Q8C0Q4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nek11Q8C0Q4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.19■■□□□ 1.78
Nek11Q8C0Q4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms