Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18,19■□□□□ 0,5
Smco3Q8BQM7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18,18■□□□□ 0,5
Smco3Q8BQM7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18,17■□□□□ 0,5
Smco3Q8BQM7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18,17■□□□□ 0,5
Smco3Q8BQM7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18,17■□□□□ 0,5
Smco3Q8BQM7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18,17■□□□□ 0,5
Smco3Q8BQM7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18,17■□□□□ 0,5
Smco3Q8BQM7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18,16■□□□□ 0,5
Smco3Q8BQM7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18,16■□□□□ 0,5
Smco3Q8BQM7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18,16■□□□□ 0,5
Smco3Q8BQM7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18,16■□□□□ 0,5
Smco3Q8BQM7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18,15■□□□□ 0,5
Smco3Q8BQM7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18,15■□□□□ 0,5
Smco3Q8BQM7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18,15■□□□□ 0,5
Smco3Q8BQM7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18,15■□□□□ 0,5
Smco3Q8BQM7 Zfp131-205ENSMUST00000223812 663 ntBASIC18,15■□□□□ 0,5
Smco3Q8BQM7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18,15■□□□□ 0,5
Smco3Q8BQM7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18,15■□□□□ 0,5
Smco3Q8BQM7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18,14■□□□□ 0,5
Smco3Q8BQM7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18,14■□□□□ 0,49
Smco3Q8BQM7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18,14■□□□□ 0,49
Smco3Q8BQM7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18,14■□□□□ 0,49
Smco3Q8BQM7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18,14■□□□□ 0,49
Smco3Q8BQM7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18,14■□□□□ 0,49
Smco3Q8BQM7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18,14■□□□□ 0,49
Smco3Q8BQM7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18,14■□□□□ 0,49
Smco3Q8BQM7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18,13■□□□□ 0,49
Smco3Q8BQM7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18,13■□□□□ 0,49
Smco3Q8BQM7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18,13■□□□□ 0,49
Smco3Q8BQM7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18,13■□□□□ 0,49
Smco3Q8BQM7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18,13■□□□□ 0,49
Smco3Q8BQM7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18,13■□□□□ 0,49
Smco3Q8BQM7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18,13■□□□□ 0,49
Smco3Q8BQM7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18,13■□□□□ 0,49
Smco3Q8BQM7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18,13■□□□□ 0,49
Smco3Q8BQM7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18,12■□□□□ 0,49
Smco3Q8BQM7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18,11■□□□□ 0,49
Smco3Q8BQM7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18,11■□□□□ 0,49
Smco3Q8BQM7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18,11■□□□□ 0,49
Smco3Q8BQM7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18,1■□□□□ 0,49
Smco3Q8BQM7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18,1■□□□□ 0,49
Smco3Q8BQM7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18,1■□□□□ 0,49
Smco3Q8BQM7 Gm24970-201ENSMUST00000175582 82 ntBASIC18,1■□□□□ 0,49
Smco3Q8BQM7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18,1■□□□□ 0,49
Smco3Q8BQM7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18,1■□□□□ 0,49
Smco3Q8BQM7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18,09■□□□□ 0,49
Smco3Q8BQM7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18,09■□□□□ 0,49
Smco3Q8BQM7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18,09■□□□□ 0,49
Smco3Q8BQM7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18,09■□□□□ 0,49
Smco3Q8BQM7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18,09■□□□□ 0,49
Smco3Q8BQM7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18,09■□□□□ 0,49
Smco3Q8BQM7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18,09■□□□□ 0,49
Smco3Q8BQM7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18,09■□□□□ 0,49
Smco3Q8BQM7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18,09■□□□□ 0,49
Smco3Q8BQM7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18,08■□□□□ 0,49
Smco3Q8BQM7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18,08■□□□□ 0,49
Smco3Q8BQM7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18,08■□□□□ 0,48
Smco3Q8BQM7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18,08■□□□□ 0,48
Smco3Q8BQM7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18,07■□□□□ 0,48
Smco3Q8BQM7 Gm13042-201ENSMUST00000119244 1955 ntBASIC18,07■□□□□ 0,48
Smco3Q8BQM7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18,07■□□□□ 0,48
Smco3Q8BQM7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18,07■□□□□ 0,48
Smco3Q8BQM7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18,06■□□□□ 0,48
Smco3Q8BQM7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18,06■□□□□ 0,48
Smco3Q8BQM7 Gm9397-201ENSMUST00000200125 605 ntBASIC18,06■□□□□ 0,48
Smco3Q8BQM7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18,06■□□□□ 0,48
Smco3Q8BQM7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18,06■□□□□ 0,48
Smco3Q8BQM7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18,05■□□□□ 0,48
Smco3Q8BQM7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18,05■□□□□ 0,48
Smco3Q8BQM7 Gm6277-202ENSMUST00000224036 2779 ntBASIC18,05■□□□□ 0,48
Smco3Q8BQM7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18,05■□□□□ 0,48
Smco3Q8BQM7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18,05■□□□□ 0,48
Smco3Q8BQM7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18,05■□□□□ 0,48
Smco3Q8BQM7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18,05■□□□□ 0,48
Smco3Q8BQM7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18,04■□□□□ 0,48
Smco3Q8BQM7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18,04■□□□□ 0,48
Smco3Q8BQM7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18,04■□□□□ 0,48
Smco3Q8BQM7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18,04■□□□□ 0,48
Smco3Q8BQM7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18,04■□□□□ 0,48
Smco3Q8BQM7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18,04■□□□□ 0,48
Smco3Q8BQM7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18,03■□□□□ 0,48
Smco3Q8BQM7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18,03■□□□□ 0,48
Smco3Q8BQM7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18,03■□□□□ 0,48
Smco3Q8BQM7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18,03■□□□□ 0,48
Smco3Q8BQM7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18,03■□□□□ 0,48
Smco3Q8BQM7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18,03■□□□□ 0,48
Smco3Q8BQM7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18,03■□□□□ 0,48
Smco3Q8BQM7 Gm14121-201ENSMUST00000121441 1380 ntBASIC18,03■□□□□ 0,48
Retrieved 100 of 76,532 protein–RNA pairs in 36,7 ms