Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ckap4Q8BMK4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.81■□□□□ 0.92
Ckap4Q8BMK4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ckap4Q8BMK4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.8■□□□□ 0.92
Ckap4Q8BMK4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ckap4Q8BMK4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ckap4Q8BMK4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ckap4Q8BMK4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ckap4Q8BMK4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ckap4Q8BMK4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ckap4Q8BMK4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ckap4Q8BMK4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ckap4Q8BMK4 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.79■□□□□ 0.92
Ckap4Q8BMK4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ckap4Q8BMK4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ckap4Q8BMK4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.77■□□□□ 0.92
Ckap4Q8BMK4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ckap4Q8BMK4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.75■□□□□ 0.91
Ckap4Q8BMK4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ckap4Q8BMK4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ckap4Q8BMK4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.75■□□□□ 0.91
Ckap4Q8BMK4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ckap4Q8BMK4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ckap4Q8BMK4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ckap4Q8BMK4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ckap4Q8BMK4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ckap4Q8BMK4 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.73■□□□□ 0.91
Ckap4Q8BMK4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ckap4Q8BMK4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ckap4Q8BMK4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap4Q8BMK4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap4Q8BMK4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap4Q8BMK4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap4Q8BMK4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Ckap4Q8BMK4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ckap4Q8BMK4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap4Q8BMK4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap4Q8BMK4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap4Q8BMK4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap4Q8BMK4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ckap4Q8BMK4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap4Q8BMK4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Ckap4Q8BMK4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ckap4Q8BMK4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ckap4Q8BMK4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ckap4Q8BMK4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ckap4Q8BMK4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ckap4Q8BMK4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ckap4Q8BMK4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.69■□□□□ 0.9
Ckap4Q8BMK4 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.69■□□□□ 0.9
Ckap4Q8BMK4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap4Q8BMK4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap4Q8BMK4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ckap4Q8BMK4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap4Q8BMK4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap4Q8BMK4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap4Q8BMK4 Mir3960-201ENSMUST00000198213 73 ntBASIC20.68■□□□□ 0.9
Ckap4Q8BMK4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ckap4Q8BMK4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap4Q8BMK4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.67■□□□□ 0.9
Ckap4Q8BMK4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap4Q8BMK4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap4Q8BMK4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap4Q8BMK4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap4Q8BMK4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.66■□□□□ 0.9
Ckap4Q8BMK4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.66■□□□□ 0.9
Ckap4Q8BMK4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap4Q8BMK4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap4Q8BMK4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap4Q8BMK4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ckap4Q8BMK4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap4Q8BMK4 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.65■□□□□ 0.9
Ckap4Q8BMK4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ckap4Q8BMK4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap4Q8BMK4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ckap4Q8BMK4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap4Q8BMK4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms