Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cdkl3Q8BLF2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdkl3Q8BLF2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdkl3Q8BLF2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkl3Q8BLF2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkl3Q8BLF2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkl3Q8BLF2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkl3Q8BLF2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkl3Q8BLF2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkl3Q8BLF2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl3Q8BLF2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.03■□□□□ 0.64
Cdkl3Q8BLF2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cdkl3Q8BLF2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl3Q8BLF2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cdkl3Q8BLF2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl3Q8BLF2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkl3Q8BLF2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cdkl3Q8BLF2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl3Q8BLF2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cdkl3Q8BLF2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Cdkl3Q8BLF2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Cdkl3Q8BLF2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkl3Q8BLF2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cdkl3Q8BLF2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cdkl3Q8BLF2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cdkl3Q8BLF2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl3Q8BLF2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl3Q8BLF2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl3Q8BLF2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl3Q8BLF2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl3Q8BLF2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl3Q8BLF2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl3Q8BLF2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkl3Q8BLF2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cdkl3Q8BLF2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cdkl3Q8BLF2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl3Q8BLF2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Cdkl3Q8BLF2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl3Q8BLF2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkl3Q8BLF2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cdkl3Q8BLF2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19■□□□□ 0.63
Cdkl3Q8BLF2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl3Q8BLF2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl3Q8BLF2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl3Q8BLF2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl3Q8BLF2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl3Q8BLF2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cdkl3Q8BLF2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl3Q8BLF2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cdkl3Q8BLF2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl3Q8BLF2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cdkl3Q8BLF2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl3Q8BLF2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Cdkl3Q8BLF2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl3Q8BLF2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl3Q8BLF2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl3Q8BLF2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl3Q8BLF2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl3Q8BLF2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.97■□□□□ 0.63
Cdkl3Q8BLF2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl3Q8BLF2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cdkl3Q8BLF2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl3Q8BLF2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.96■□□□□ 0.63
Cdkl3Q8BLF2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl3Q8BLF2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl3Q8BLF2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl3Q8BLF2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl3Q8BLF2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.95■□□□□ 0.62
Cdkl3Q8BLF2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cdkl3Q8BLF2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl3Q8BLF2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl3Q8BLF2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.94■□□□□ 0.62
Cdkl3Q8BLF2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cdkl3Q8BLF2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl3Q8BLF2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cdkl3Q8BLF2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl3Q8BLF2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl3Q8BLF2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl3Q8BLF2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.93■□□□□ 0.62
Cdkl3Q8BLF2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl3Q8BLF2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl3Q8BLF2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Cdkl3Q8BLF2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl3Q8BLF2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl3Q8BLF2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Cdkl3Q8BLF2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl3Q8BLF2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl3Q8BLF2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl3Q8BLF2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl3Q8BLF2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl3Q8BLF2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl3Q8BLF2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdkl3Q8BLF2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl3Q8BLF2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl3Q8BLF2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl3Q8BLF2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl3Q8BLF2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl3Q8BLF2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl3Q8BLF2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl3Q8BLF2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms