Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg1Q8BKX6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.21■□□□□ 0.67
Smg1Q8BKX6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smg1Q8BKX6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg1Q8BKX6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.2■□□□□ 0.66
Smg1Q8BKX6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg1Q8BKX6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg1Q8BKX6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.2■□□□□ 0.66
Smg1Q8BKX6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg1Q8BKX6 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.2■□□□□ 0.66
Smg1Q8BKX6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg1Q8BKX6 Gm9847-201ENSMUST00000052528 599 ntBASIC19.19■□□□□ 0.66
Smg1Q8BKX6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Smg1Q8BKX6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg1Q8BKX6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg1Q8BKX6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg1Q8BKX6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg1Q8BKX6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg1Q8BKX6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg1Q8BKX6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smg1Q8BKX6 Gm8495-201ENSMUST00000188740 694 ntBASIC19.16■□□□□ 0.66
Smg1Q8BKX6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.16■□□□□ 0.66
Smg1Q8BKX6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smg1Q8BKX6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smg1Q8BKX6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.16■□□□□ 0.66
Smg1Q8BKX6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.15■□□□□ 0.66
Smg1Q8BKX6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smg1Q8BKX6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smg1Q8BKX6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.14■□□□□ 0.66
Smg1Q8BKX6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.14■□□□□ 0.65
Smg1Q8BKX6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smg1Q8BKX6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Smg1Q8BKX6 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.13■□□□□ 0.65
Smg1Q8BKX6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smg1Q8BKX6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smg1Q8BKX6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smg1Q8BKX6 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.12■□□□□ 0.65
Smg1Q8BKX6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smg1Q8BKX6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smg1Q8BKX6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smg1Q8BKX6 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.12■□□□□ 0.65
Smg1Q8BKX6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smg1Q8BKX6 Gm27454-201ENSMUST00000185090 204 ntBASIC19.12■□□□□ 0.65
Smg1Q8BKX6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smg1Q8BKX6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smg1Q8BKX6 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.11■□□□□ 0.65
Smg1Q8BKX6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smg1Q8BKX6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smg1Q8BKX6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smg1Q8BKX6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smg1Q8BKX6 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.11■□□□□ 0.65
Smg1Q8BKX6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg1Q8BKX6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.1■□□□□ 0.65
Smg1Q8BKX6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smg1Q8BKX6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg1Q8BKX6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smg1Q8BKX6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg1Q8BKX6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smg1Q8BKX6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smg1Q8BKX6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.09■□□□□ 0.65
Smg1Q8BKX6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smg1Q8BKX6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Smg1Q8BKX6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.09■□□□□ 0.65
Smg1Q8BKX6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smg1Q8BKX6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smg1Q8BKX6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smg1Q8BKX6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smg1Q8BKX6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smg1Q8BKX6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smg1Q8BKX6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Smg1Q8BKX6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Smg1Q8BKX6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smg1Q8BKX6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smg1Q8BKX6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.08■□□□□ 0.64
Smg1Q8BKX6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smg1Q8BKX6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smg1Q8BKX6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smg1Q8BKX6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smg1Q8BKX6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smg1Q8BKX6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smg1Q8BKX6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.07■□□□□ 0.64
Smg1Q8BKX6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smg1Q8BKX6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smg1Q8BKX6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smg1Q8BKX6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smg1Q8BKX6 Gm12922-201ENSMUST00000120626 809 ntBASIC19.06■□□□□ 0.64
Smg1Q8BKX6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smg1Q8BKX6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.06■□□□□ 0.64
Smg1Q8BKX6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Smg1Q8BKX6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smg1Q8BKX6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Smg1Q8BKX6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.05■□□□□ 0.64
Smg1Q8BKX6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smg1Q8BKX6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smg1Q8BKX6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smg1Q8BKX6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.05■□□□□ 0.64
Smg1Q8BKX6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smg1Q8BKX6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smg1Q8BKX6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smg1Q8BKX6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms