Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn3bQ8BHK2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn3bQ8BHK2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn3bQ8BHK2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn3bQ8BHK2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn3bQ8BHK2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn3bQ8BHK2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn3bQ8BHK2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.56■□□□□ 0.88
Scn3bQ8BHK2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3bQ8BHK2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3bQ8BHK2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3bQ8BHK2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Scn3bQ8BHK2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3bQ8BHK2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.55■□□□□ 0.88
Scn3bQ8BHK2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Scn3bQ8BHK2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Scn3bQ8BHK2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn3bQ8BHK2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.54■□□□□ 0.88
Scn3bQ8BHK2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Scn3bQ8BHK2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn3bQ8BHK2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn3bQ8BHK2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scn3bQ8BHK2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3bQ8BHK2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.53■□□□□ 0.88
Scn3bQ8BHK2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scn3bQ8BHK2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3bQ8BHK2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3bQ8BHK2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3bQ8BHK2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn3bQ8BHK2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Scn3bQ8BHK2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Scn3bQ8BHK2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.51■□□□□ 0.87
Scn3bQ8BHK2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn3bQ8BHK2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn3bQ8BHK2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn3bQ8BHK2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn3bQ8BHK2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn3bQ8BHK2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn3bQ8BHK2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn3bQ8BHK2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn3bQ8BHK2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Scn3bQ8BHK2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn3bQ8BHK2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.49■□□□□ 0.87
Scn3bQ8BHK2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn3bQ8BHK2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.49■□□□□ 0.87
Scn3bQ8BHK2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn3bQ8BHK2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn3bQ8BHK2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Scn3bQ8BHK2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn3bQ8BHK2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn3bQ8BHK2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scn3bQ8BHK2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn3bQ8BHK2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn3bQ8BHK2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
Scn3bQ8BHK2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn3bQ8BHK2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn3bQ8BHK2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn3bQ8BHK2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn3bQ8BHK2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn3bQ8BHK2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn3bQ8BHK2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn3bQ8BHK2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Scn3bQ8BHK2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn3bQ8BHK2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn3bQ8BHK2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn3bQ8BHK2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.44■□□□□ 0.86
Scn3bQ8BHK2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn3bQ8BHK2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.44■□□□□ 0.86
Scn3bQ8BHK2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.44■□□□□ 0.86
Scn3bQ8BHK2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.43■□□□□ 0.86
Scn3bQ8BHK2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn3bQ8BHK2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Scn3bQ8BHK2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn3bQ8BHK2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.42■□□□□ 0.86
Scn3bQ8BHK2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn3bQ8BHK2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn3bQ8BHK2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn3bQ8BHK2 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.41■□□□□ 0.86
Scn3bQ8BHK2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn3bQ8BHK2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn3bQ8BHK2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scn3bQ8BHK2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn3bQ8BHK2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Scn3bQ8BHK2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scn3bQ8BHK2 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.4■□□□□ 0.86
Scn3bQ8BHK2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn3bQ8BHK2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn3bQ8BHK2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn3bQ8BHK2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn3bQ8BHK2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn3bQ8BHK2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn3bQ8BHK2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn3bQ8BHK2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn3bQ8BHK2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn3bQ8BHK2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.39■□□□□ 0.85
Scn3bQ8BHK2 Gm37136-201ENSMUST00000194368 194 ntBASIC20.38■□□□□ 0.85
Scn3bQ8BHK2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn3bQ8BHK2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Scn3bQ8BHK2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn3bQ8BHK2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms