Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.92■■□□□ 1.42
Depdc1bQ8BH88 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Depdc1bQ8BH88 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Depdc1bQ8BH88 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Depdc1bQ8BH88 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Depdc1bQ8BH88 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.91■■□□□ 1.42
Depdc1bQ8BH88 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Depdc1bQ8BH88 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Depdc1bQ8BH88 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Depdc1bQ8BH88 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Depdc1bQ8BH88 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.91■■□□□ 1.42
Depdc1bQ8BH88 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Depdc1bQ8BH88 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Depdc1bQ8BH88 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Depdc1bQ8BH88 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Depdc1bQ8BH88 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Depdc1bQ8BH88 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Depdc1bQ8BH88 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.89■■□□□ 1.41
Depdc1bQ8BH88 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Depdc1bQ8BH88 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Depdc1bQ8BH88 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.88■■□□□ 1.41
Depdc1bQ8BH88 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Depdc1bQ8BH88 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Depdc1bQ8BH88 Gm27502-201ENSMUST00000183495 199 ntBASIC23.88■■□□□ 1.41
Depdc1bQ8BH88 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.88■■□□□ 1.41
Depdc1bQ8BH88 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
Depdc1bQ8BH88 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
Depdc1bQ8BH88 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Depdc1bQ8BH88 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.87■■□□□ 1.41
Depdc1bQ8BH88 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
Depdc1bQ8BH88 Terc-201ENSMUST00000082862 423 ntBASIC23.87■■□□□ 1.41
Depdc1bQ8BH88 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Depdc1bQ8BH88 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Depdc1bQ8BH88 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Depdc1bQ8BH88 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Depdc1bQ8BH88 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Depdc1bQ8BH88 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Depdc1bQ8BH88 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Depdc1bQ8BH88 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Depdc1bQ8BH88 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Depdc1bQ8BH88 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Depdc1bQ8BH88 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Depdc1bQ8BH88 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Depdc1bQ8BH88 Gm7332-201ENSMUST00000118351 454 ntBASIC23.85■■□□□ 1.41
Depdc1bQ8BH88 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Depdc1bQ8BH88 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Depdc1bQ8BH88 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Depdc1bQ8BH88 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Depdc1bQ8BH88 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Depdc1bQ8BH88 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Depdc1bQ8BH88 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Depdc1bQ8BH88 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.84■■□□□ 1.41
Depdc1bQ8BH88 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.84■■□□□ 1.41
Depdc1bQ8BH88 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Depdc1bQ8BH88 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Depdc1bQ8BH88 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Depdc1bQ8BH88 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Depdc1bQ8BH88 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Depdc1bQ8BH88 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Depdc1bQ8BH88 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Depdc1bQ8BH88 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Depdc1bQ8BH88 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
Depdc1bQ8BH88 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Depdc1bQ8BH88 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
Depdc1bQ8BH88 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Depdc1bQ8BH88 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Depdc1bQ8BH88 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Depdc1bQ8BH88 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Depdc1bQ8BH88 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Depdc1bQ8BH88 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Depdc1bQ8BH88 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
Depdc1bQ8BH88 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Depdc1bQ8BH88 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Depdc1bQ8BH88 Gm14523-201ENSMUST00000117260 558 ntBASIC23.8■■□□□ 1.4
Depdc1bQ8BH88 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Depdc1bQ8BH88 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Depdc1bQ8BH88 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Depdc1bQ8BH88 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.79■■□□□ 1.4
Depdc1bQ8BH88 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Depdc1bQ8BH88 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Depdc1bQ8BH88 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Depdc1bQ8BH88 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Depdc1bQ8BH88 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Depdc1bQ8BH88 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.78■■□□□ 1.4
Depdc1bQ8BH88 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Depdc1bQ8BH88 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.78■■□□□ 1.4
Depdc1bQ8BH88 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Depdc1bQ8BH88 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Depdc1bQ8BH88 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.77■■□□□ 1.4
Depdc1bQ8BH88 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Depdc1bQ8BH88 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Depdc1bQ8BH88 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Depdc1bQ8BH88 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Depdc1bQ8BH88 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Depdc1bQ8BH88 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.76■■□□□ 1.39
Depdc1bQ8BH88 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Depdc1bQ8BH88 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Depdc1bQ8BH88 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.75■■□□□ 1.39
Depdc1bQ8BH88 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Depdc1bQ8BH88 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms