Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Trim6Q8BGE7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim6Q8BGE7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
Trim6Q8BGE7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim6Q8BGE7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim6Q8BGE7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.37■■□□□ 1.33
Trim6Q8BGE7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.37■■□□□ 1.33
Trim6Q8BGE7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim6Q8BGE7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Trim6Q8BGE7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim6Q8BGE7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim6Q8BGE7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim6Q8BGE7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
Trim6Q8BGE7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim6Q8BGE7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Trim6Q8BGE7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim6Q8BGE7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim6Q8BGE7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim6Q8BGE7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim6Q8BGE7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim6Q8BGE7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim6Q8BGE7 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.33■■□□□ 1.33
Trim6Q8BGE7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trim6Q8BGE7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Trim6Q8BGE7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Trim6Q8BGE7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim6Q8BGE7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Trim6Q8BGE7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim6Q8BGE7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.32■■□□□ 1.32
Trim6Q8BGE7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.31■■□□□ 1.32
Trim6Q8BGE7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.31■■□□□ 1.32
Trim6Q8BGE7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim6Q8BGE7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim6Q8BGE7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim6Q8BGE7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim6Q8BGE7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.3■■□□□ 1.32
Trim6Q8BGE7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim6Q8BGE7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim6Q8BGE7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim6Q8BGE7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim6Q8BGE7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.29■■□□□ 1.32
Trim6Q8BGE7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim6Q8BGE7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim6Q8BGE7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.28■■□□□ 1.32
Trim6Q8BGE7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim6Q8BGE7 Gm6821-201ENSMUST00000107540 542 ntBASIC23.28■■□□□ 1.32
Trim6Q8BGE7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim6Q8BGE7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim6Q8BGE7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim6Q8BGE7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim6Q8BGE7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim6Q8BGE7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim6Q8BGE7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim6Q8BGE7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Trim6Q8BGE7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim6Q8BGE7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim6Q8BGE7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim6Q8BGE7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Trim6Q8BGE7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim6Q8BGE7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim6Q8BGE7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim6Q8BGE7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Trim6Q8BGE7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim6Q8BGE7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim6Q8BGE7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim6Q8BGE7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trim6Q8BGE7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.24■■□□□ 1.31
Trim6Q8BGE7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim6Q8BGE7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Trim6Q8BGE7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim6Q8BGE7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim6Q8BGE7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim6Q8BGE7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Trim6Q8BGE7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Trim6Q8BGE7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Trim6Q8BGE7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim6Q8BGE7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim6Q8BGE7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim6Q8BGE7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim6Q8BGE7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Trim6Q8BGE7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim6Q8BGE7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim6Q8BGE7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim6Q8BGE7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trim6Q8BGE7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim6Q8BGE7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.19■■□□□ 1.3
Trim6Q8BGE7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim6Q8BGE7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Trim6Q8BGE7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms