Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Sptlc3Q8BG54 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sptlc3Q8BG54 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sptlc3Q8BG54 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Sptlc3Q8BG54 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Sptlc3Q8BG54 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sptlc3Q8BG54 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Sptlc3Q8BG54 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Sptlc3Q8BG54 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Sptlc3Q8BG54 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.77■■□□□ 1.88
Sptlc3Q8BG54 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Sptlc3Q8BG54 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Sptlc3Q8BG54 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.76■■□□□ 1.87
Sptlc3Q8BG54 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
Sptlc3Q8BG54 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sptlc3Q8BG54 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Sptlc3Q8BG54 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Sptlc3Q8BG54 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Sptlc3Q8BG54 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sptlc3Q8BG54 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sptlc3Q8BG54 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.75■■□□□ 1.87
Sptlc3Q8BG54 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sptlc3Q8BG54 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Sptlc3Q8BG54 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Sptlc3Q8BG54 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Sptlc3Q8BG54 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sptlc3Q8BG54 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Sptlc3Q8BG54 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Sptlc3Q8BG54 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sptlc3Q8BG54 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.72■■□□□ 1.87
Sptlc3Q8BG54 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
Sptlc3Q8BG54 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sptlc3Q8BG54 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sptlc3Q8BG54 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sptlc3Q8BG54 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sptlc3Q8BG54 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.72■■□□□ 1.87
Sptlc3Q8BG54 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Sptlc3Q8BG54 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Sptlc3Q8BG54 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Sptlc3Q8BG54 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Sptlc3Q8BG54 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.7■■□□□ 1.86
Sptlc3Q8BG54 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.7■■□□□ 1.86
Sptlc3Q8BG54 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Sptlc3Q8BG54 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
Sptlc3Q8BG54 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Sptlc3Q8BG54 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.69■■□□□ 1.86
Sptlc3Q8BG54 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Sptlc3Q8BG54 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sptlc3Q8BG54 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sptlc3Q8BG54 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Sptlc3Q8BG54 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
Sptlc3Q8BG54 Gm43566-201ENSMUST00000196851 808 ntBASIC26.68■■□□□ 1.86
Sptlc3Q8BG54 Gm45444-201ENSMUST00000211394 898 ntBASIC26.68■■□□□ 1.86
Sptlc3Q8BG54 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sptlc3Q8BG54 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
Sptlc3Q8BG54 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Sptlc3Q8BG54 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Sptlc3Q8BG54 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Sptlc3Q8BG54 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Sptlc3Q8BG54 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Sptlc3Q8BG54 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sptlc3Q8BG54 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.66■■□□□ 1.86
Sptlc3Q8BG54 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.66■■□□□ 1.86
Sptlc3Q8BG54 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sptlc3Q8BG54 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Sptlc3Q8BG54 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Sptlc3Q8BG54 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.65■■□□□ 1.86
Sptlc3Q8BG54 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Sptlc3Q8BG54 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.65■■□□□ 1.86
Sptlc3Q8BG54 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Sptlc3Q8BG54 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Sptlc3Q8BG54 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Sptlc3Q8BG54 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Sptlc3Q8BG54 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.64■■□□□ 1.86
Sptlc3Q8BG54 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.63■■□□□ 1.85
Sptlc3Q8BG54 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sptlc3Q8BG54 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sptlc3Q8BG54 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Sptlc3Q8BG54 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sptlc3Q8BG54 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Sptlc3Q8BG54 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Sptlc3Q8BG54 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Sptlc3Q8BG54 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Sptlc3Q8BG54 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sptlc3Q8BG54 Gm15546-201ENSMUST00000122095 826 ntBASIC26.57■■□□□ 1.84
Sptlc3Q8BG54 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.57■■□□□ 1.84
Sptlc3Q8BG54 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.57■■□□□ 1.84
Sptlc3Q8BG54 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sptlc3Q8BG54 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Sptlc3Q8BG54 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sptlc3Q8BG54 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.56■■□□□ 1.84
Sptlc3Q8BG54 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.56■■□□□ 1.84
Sptlc3Q8BG54 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Sptlc3Q8BG54 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sptlc3Q8BG54 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Sptlc3Q8BG54 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
Sptlc3Q8BG54 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sptlc3Q8BG54 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sptlc3Q8BG54 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sptlc3Q8BG54 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms