Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.51■■□□□ 1.03
Trim50Q810I2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim50Q810I2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim50Q810I2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim50Q810I2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim50Q810I2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim50Q810I2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Trim50Q810I2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim50Q810I2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim50Q810I2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim50Q810I2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim50Q810I2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim50Q810I2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Trim50Q810I2 Gm44428-201ENSMUST00000204474 874 ntBASIC21.49■■□□□ 1.03
Trim50Q810I2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
Trim50Q810I2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim50Q810I2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.48■■□□□ 1.03
Trim50Q810I2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.48■■□□□ 1.03
Trim50Q810I2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.48■■□□□ 1.03
Trim50Q810I2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim50Q810I2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim50Q810I2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim50Q810I2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim50Q810I2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim50Q810I2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim50Q810I2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim50Q810I2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Trim50Q810I2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.46■■□□□ 1.03
Trim50Q810I2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
Trim50Q810I2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
Trim50Q810I2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim50Q810I2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim50Q810I2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim50Q810I2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim50Q810I2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trim50Q810I2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim50Q810I2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim50Q810I2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim50Q810I2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.43■■□□□ 1.02
Trim50Q810I2 Mir6538-201ENSMUST00000183713 110 ntBASIC21.43■■□□□ 1.02
Trim50Q810I2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim50Q810I2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim50Q810I2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim50Q810I2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Trim50Q810I2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim50Q810I2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim50Q810I2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim50Q810I2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trim50Q810I2 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.41■■□□□ 1.02
Trim50Q810I2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim50Q810I2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim50Q810I2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim50Q810I2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim50Q810I2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim50Q810I2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim50Q810I2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim50Q810I2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim50Q810I2 Gm27502-201ENSMUST00000183495 199 ntBASIC21.39■■□□□ 1.01
Trim50Q810I2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim50Q810I2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim50Q810I2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Trim50Q810I2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim50Q810I2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim50Q810I2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim50Q810I2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim50Q810I2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim50Q810I2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.37■■□□□ 1.01
Trim50Q810I2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Trim50Q810I2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim50Q810I2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Trim50Q810I2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim50Q810I2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim50Q810I2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim50Q810I2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim50Q810I2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.36■■□□□ 1.01
Trim50Q810I2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Trim50Q810I2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim50Q810I2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim50Q810I2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Trim50Q810I2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim50Q810I2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim50Q810I2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim50Q810I2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trim50Q810I2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim50Q810I2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim50Q810I2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim50Q810I2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim50Q810I2 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.33■■□□□ 1.01
Trim50Q810I2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim50Q810I2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim50Q810I2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim50Q810I2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.32■■□□□ 1
Trim50Q810I2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim50Q810I2 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.32■■□□□ 1
Trim50Q810I2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim50Q810I2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.32■■□□□ 1
Trim50Q810I2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim50Q810I2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim50Q810I2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim50Q810I2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms