Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx42Q810A7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx42Q810A7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx42Q810A7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx42Q810A7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx42Q810A7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx42Q810A7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx42Q810A7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx42Q810A7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx42Q810A7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx42Q810A7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx42Q810A7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Ddx42Q810A7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx42Q810A7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Ddx42Q810A7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx42Q810A7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx42Q810A7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.15■■□□□ 1.14
Ddx42Q810A7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx42Q810A7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx42Q810A7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx42Q810A7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx42Q810A7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx42Q810A7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.14■■□□□ 1.13
Ddx42Q810A7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx42Q810A7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx42Q810A7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Ddx42Q810A7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx42Q810A7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx42Q810A7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx42Q810A7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx42Q810A7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx42Q810A7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx42Q810A7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx42Q810A7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx42Q810A7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ddx42Q810A7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Ddx42Q810A7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.12■■□□□ 1.13
Ddx42Q810A7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx42Q810A7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx42Q810A7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx42Q810A7 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.11■■□□□ 1.13
Ddx42Q810A7 Gm11175-201ENSMUST00000116172 543 ntBASIC22.11■■□□□ 1.13
Ddx42Q810A7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Ddx42Q810A7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.11■■□□□ 1.13
Ddx42Q810A7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx42Q810A7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Ddx42Q810A7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx42Q810A7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx42Q810A7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx42Q810A7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ddx42Q810A7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx42Q810A7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx42Q810A7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx42Q810A7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx42Q810A7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx42Q810A7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx42Q810A7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx42Q810A7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx42Q810A7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx42Q810A7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Ddx42Q810A7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
Ddx42Q810A7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx42Q810A7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Ddx42Q810A7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx42Q810A7 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.06■■□□□ 1.12
Ddx42Q810A7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx42Q810A7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx42Q810A7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx42Q810A7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ddx42Q810A7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx42Q810A7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx42Q810A7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.06■■□□□ 1.12
Ddx42Q810A7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx42Q810A7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
Ddx42Q810A7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx42Q810A7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx42Q810A7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.05■■□□□ 1.12
Ddx42Q810A7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.05■■□□□ 1.12
Ddx42Q810A7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.05■■□□□ 1.12
Ddx42Q810A7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx42Q810A7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx42Q810A7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ddx42Q810A7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx42Q810A7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx42Q810A7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx42Q810A7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx42Q810A7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx42Q810A7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ddx42Q810A7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx42Q810A7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx42Q810A7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx42Q810A7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx42Q810A7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx42Q810A7 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.03■■□□□ 1.12
Ddx42Q810A7 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.03■■□□□ 1.12
Ddx42Q810A7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.02■■□□□ 1.12
Ddx42Q810A7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Ddx42Q810A7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx42Q810A7 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.01■■□□□ 1.11
Ddx42Q810A7 Cap2-205ENSMUST00000225824 1634 ntBASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms