Protein–RNA interactions for Protein: Q80X59

Tmco5b, Transmembrane and coiled-coil domain-containing protein 5B, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmco5bQ80X59 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Tmco5bQ80X59 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Tmco5bQ80X59 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tmco5bQ80X59 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tmco5bQ80X59 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC28.21■■■□□ 2.11
Tmco5bQ80X59 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC28.21■■■□□ 2.11
Tmco5bQ80X59 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.21■■■□□ 2.11
Tmco5bQ80X59 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Tmco5bQ80X59 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Tmco5bQ80X59 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
Tmco5bQ80X59 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC28.2■■■□□ 2.1
Tmco5bQ80X59 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.2■■■□□ 2.1
Tmco5bQ80X59 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Tmco5bQ80X59 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Tmco5bQ80X59 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Tmco5bQ80X59 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.19■■■□□ 2.1
Tmco5bQ80X59 AC117769.4-201ENSMUST00000225679 685 ntBASIC28.19■■■□□ 2.1
Tmco5bQ80X59 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Tmco5bQ80X59 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tmco5bQ80X59 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC28.18■■■□□ 2.1
Tmco5bQ80X59 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tmco5bQ80X59 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tmco5bQ80X59 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tmco5bQ80X59 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tmco5bQ80X59 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tmco5bQ80X59 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tmco5bQ80X59 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tmco5bQ80X59 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tmco5bQ80X59 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Tmco5bQ80X59 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tmco5bQ80X59 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tmco5bQ80X59 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Tmco5bQ80X59 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tmco5bQ80X59 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tmco5bQ80X59 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Tmco5bQ80X59 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tmco5bQ80X59 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tmco5bQ80X59 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Tmco5bQ80X59 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tmco5bQ80X59 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tmco5bQ80X59 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tmco5bQ80X59 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Tmco5bQ80X59 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.12■■■□□ 2.09
Tmco5bQ80X59 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tmco5bQ80X59 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tmco5bQ80X59 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tmco5bQ80X59 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Tmco5bQ80X59 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Tmco5bQ80X59 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tmco5bQ80X59 Gm6934-201ENSMUST00000194780 1905 ntBASIC28.1■■■□□ 2.09
Tmco5bQ80X59 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tmco5bQ80X59 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tmco5bQ80X59 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tmco5bQ80X59 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
Tmco5bQ80X59 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tmco5bQ80X59 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tmco5bQ80X59 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Tmco5bQ80X59 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC28.09■■■□□ 2.09
Tmco5bQ80X59 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Tmco5bQ80X59 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tmco5bQ80X59 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Tmco5bQ80X59 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Tmco5bQ80X59 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Tmco5bQ80X59 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tmco5bQ80X59 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tmco5bQ80X59 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Tmco5bQ80X59 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tmco5bQ80X59 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
Tmco5bQ80X59 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tmco5bQ80X59 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Tmco5bQ80X59 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC28.05■■■□□ 2.08
Tmco5bQ80X59 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Tmco5bQ80X59 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Tmco5bQ80X59 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC28.05■■■□□ 2.08
Tmco5bQ80X59 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Tmco5bQ80X59 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
Tmco5bQ80X59 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC28.04■■■□□ 2.08
Tmco5bQ80X59 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Tmco5bQ80X59 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Tmco5bQ80X59 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Tmco5bQ80X59 AC153524.1-201ENSMUST00000220436 1935 ntBASIC28.04■■■□□ 2.08
Tmco5bQ80X59 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Tmco5bQ80X59 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tmco5bQ80X59 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Tmco5bQ80X59 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC28.03■■■□□ 2.08
Tmco5bQ80X59 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tmco5bQ80X59 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Tmco5bQ80X59 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Tmco5bQ80X59 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
Tmco5bQ80X59 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
Tmco5bQ80X59 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Tmco5bQ80X59 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Tmco5bQ80X59 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Tmco5bQ80X59 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Tmco5bQ80X59 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC28■■■□□ 2.07
Tmco5bQ80X59 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Tmco5bQ80X59 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC27.99■■■□□ 2.07
Tmco5bQ80X59 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Tmco5bQ80X59 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
Tmco5bQ80X59 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 120.6 ms