Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
Rfx4Q7TNK1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx4Q7TNK1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rfx4Q7TNK1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx4Q7TNK1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.16■□□□□ 0.98
Rfx4Q7TNK1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.16■□□□□ 0.98
Rfx4Q7TNK1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx4Q7TNK1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx4Q7TNK1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx4Q7TNK1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx4Q7TNK1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.15■□□□□ 0.98
Rfx4Q7TNK1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx4Q7TNK1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx4Q7TNK1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx4Q7TNK1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx4Q7TNK1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.13■□□□□ 0.97
Rfx4Q7TNK1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx4Q7TNK1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx4Q7TNK1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx4Q7TNK1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx4Q7TNK1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Rfx4Q7TNK1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx4Q7TNK1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx4Q7TNK1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.12■□□□□ 0.97
Rfx4Q7TNK1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx4Q7TNK1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx4Q7TNK1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rfx4Q7TNK1 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.12■□□□□ 0.97
Rfx4Q7TNK1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx4Q7TNK1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx4Q7TNK1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx4Q7TNK1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx4Q7TNK1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx4Q7TNK1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx4Q7TNK1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx4Q7TNK1 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.1■□□□□ 0.97
Rfx4Q7TNK1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx4Q7TNK1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx4Q7TNK1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx4Q7TNK1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx4Q7TNK1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Rfx4Q7TNK1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx4Q7TNK1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rfx4Q7TNK1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx4Q7TNK1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Rfx4Q7TNK1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rfx4Q7TNK1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx4Q7TNK1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfx4Q7TNK1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rfx4Q7TNK1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Rfx4Q7TNK1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rfx4Q7TNK1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rfx4Q7TNK1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx4Q7TNK1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx4Q7TNK1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx4Q7TNK1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.07■□□□□ 0.96
Rfx4Q7TNK1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx4Q7TNK1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx4Q7TNK1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Rfx4Q7TNK1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.06■□□□□ 0.96
Rfx4Q7TNK1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Rfx4Q7TNK1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.06■□□□□ 0.96
Rfx4Q7TNK1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.06■□□□□ 0.96
Rfx4Q7TNK1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfx4Q7TNK1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx4Q7TNK1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx4Q7TNK1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rfx4Q7TNK1 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.05■□□□□ 0.96
Rfx4Q7TNK1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfx4Q7TNK1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfx4Q7TNK1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rfx4Q7TNK1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx4Q7TNK1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx4Q7TNK1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx4Q7TNK1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx4Q7TNK1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx4Q7TNK1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx4Q7TNK1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx4Q7TNK1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx4Q7TNK1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx4Q7TNK1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx4Q7TNK1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx4Q7TNK1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx4Q7TNK1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.02■□□□□ 0.95
Rfx4Q7TNK1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rfx4Q7TNK1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Rfx4Q7TNK1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx4Q7TNK1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rfx4Q7TNK1 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.01■□□□□ 0.95
Rfx4Q7TNK1 Gm22567-201ENSMUST00000175542 342 ntBASIC21.01■□□□□ 0.95
Rfx4Q7TNK1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx4Q7TNK1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx4Q7TNK1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rfx4Q7TNK1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx4Q7TNK1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rfx4Q7TNK1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx4Q7TNK1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rfx4Q7TNK1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rfx4Q7TNK1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.99■□□□□ 0.95
Rfx4Q7TNK1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms