Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC40.28■■■■■ 4.04
Rtl1Q7M732 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
Rtl1Q7M732 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
Rtl1Q7M732 Gm43566-201ENSMUST00000196851 808 ntBASIC40.26■■■■■ 4.04
Rtl1Q7M732 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
Rtl1Q7M732 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC40.25■■■■■ 4.03
Rtl1Q7M732 Gm7199-201ENSMUST00000118327 1485 ntBASIC40.25■■■■■ 4.03
Rtl1Q7M732 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC40.25■■■■■ 4.03
Rtl1Q7M732 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC40.25■■■■■ 4.03
Rtl1Q7M732 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
Rtl1Q7M732 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC40.24■■■■■ 4.03
Rtl1Q7M732 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC40.24■■■■■ 4.03
Rtl1Q7M732 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC40.24■■■■■ 4.03
Rtl1Q7M732 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC40.23■■■■■ 4.03
Rtl1Q7M732 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC40.23■■■■■ 4.03
Rtl1Q7M732 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC40.22■■■■■ 4.03
Rtl1Q7M732 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC40.22■■■■■ 4.03
Rtl1Q7M732 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
Rtl1Q7M732 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC40.21■■■■■ 4.03
Rtl1Q7M732 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
Rtl1Q7M732 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
Rtl1Q7M732 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC40.21■■■■■ 4.03
Rtl1Q7M732 Gm5812-201ENSMUST00000061073 957 ntBASIC40.2■■■■■ 4.03
Rtl1Q7M732 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC40.19■■■■■ 4.02
Rtl1Q7M732 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
Rtl1Q7M732 Gm45444-201ENSMUST00000211394 898 ntBASIC40.19■■■■■ 4.02
Rtl1Q7M732 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC40.19■■■■■ 4.02
Rtl1Q7M732 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC40.18■■■■■ 4.02
Rtl1Q7M732 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
Rtl1Q7M732 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
Rtl1Q7M732 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC40.17■■■■■ 4.02
Rtl1Q7M732 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC40.17■■■■■ 4.02
Rtl1Q7M732 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC40.17■■■■■ 4.02
Rtl1Q7M732 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
Rtl1Q7M732 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC40.16■■■■■ 4.02
Rtl1Q7M732 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC40.16■■■■■ 4.02
Rtl1Q7M732 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
Rtl1Q7M732 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.02
Rtl1Q7M732 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC40.15■■■■■ 4.02
Rtl1Q7M732 AC164433.2-201ENSMUST00000226346 1701 ntBASIC40.15■■■■■ 4.02
Rtl1Q7M732 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC40.15■■■■■ 4.02
Rtl1Q7M732 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC40.14■■■■■ 4.02
Rtl1Q7M732 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC40.13■■■■■ 4.02
Rtl1Q7M732 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.02
Rtl1Q7M732 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC40.13■■■■■ 4.02
Rtl1Q7M732 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC40.12■■■■■ 4.01
Rtl1Q7M732 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
Rtl1Q7M732 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC40.11■■■■■ 4.01
Rtl1Q7M732 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
Rtl1Q7M732 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC40.1■■■■■ 4.01
Rtl1Q7M732 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC40.1■■■■■ 4.01
Rtl1Q7M732 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC40.1■■■■■ 4.01
Rtl1Q7M732 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC40.09■■■■■ 4.01
Rtl1Q7M732 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC40.09■■■■■ 4.01
Rtl1Q7M732 AC117769.4-201ENSMUST00000225679 685 ntBASIC40.09■■■■■ 4.01
Rtl1Q7M732 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC40.09■■■■■ 4.01
Rtl1Q7M732 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
Rtl1Q7M732 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
Rtl1Q7M732 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC40.08■■■■■ 4.01
Rtl1Q7M732 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4
Rtl1Q7M732 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4
Rtl1Q7M732 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC40.06■■■■■ 4
Rtl1Q7M732 Il17rd-202ENSMUST00000223942 2186 ntBASIC40.06■■■■■ 4
Rtl1Q7M732 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC40.06■■■■■ 4
Rtl1Q7M732 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC40.05■■■■■ 4
Rtl1Q7M732 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC40.04■■■■■ 4
Rtl1Q7M732 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC40.04■■■■■ 4
Rtl1Q7M732 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC40.04■■■■■ 4
Rtl1Q7M732 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC40.04■■■■■ 4
Rtl1Q7M732 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC40.03■■■■■ 4
Rtl1Q7M732 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
Rtl1Q7M732 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC40.02■■■■■ 4
Rtl1Q7M732 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC40.02■■■■■ 4
Rtl1Q7M732 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC40.02■■■■■ 4
Rtl1Q7M732 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC40.02■■■■■ 4
Rtl1Q7M732 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC40.02■■■■■ 4
Rtl1Q7M732 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
Rtl1Q7M732 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC40.02■■■■■ 4
Rtl1Q7M732 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC40.01■■■■■ 4
Rtl1Q7M732 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
Rtl1Q7M732 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC40.01■■■■■ 4
Rtl1Q7M732 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC40.01■■■■■ 4
Rtl1Q7M732 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
Rtl1Q7M732 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC39.99■■■■□ 3.99
Rtl1Q7M732 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
Rtl1Q7M732 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
Rtl1Q7M732 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
Rtl1Q7M732 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC39.98■■■■□ 3.99
Rtl1Q7M732 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
Rtl1Q7M732 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
Rtl1Q7M732 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC39.97■■■■□ 3.99
Rtl1Q7M732 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC39.97■■■■□ 3.99
Rtl1Q7M732 Gm5522-201ENSMUST00000189483 1242 ntBASIC39.96■■■■□ 3.99
Rtl1Q7M732 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC39.96■■■■□ 3.99
Rtl1Q7M732 Gm28731-201ENSMUST00000185564 1569 ntBASIC39.95■■■■□ 3.99
Rtl1Q7M732 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC39.95■■■■□ 3.99
Rtl1Q7M732 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC39.95■■■■□ 3.99
Rtl1Q7M732 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
Rtl1Q7M732 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Rtl1Q7M732 Gm13238-201ENSMUST00000117655 780 ntBASIC39.94■■■■□ 3.98
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms