Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc36Q6PDM4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc36Q6PDM4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccdc36Q6PDM4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc36Q6PDM4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc36Q6PDM4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc36Q6PDM4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc36Q6PDM4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc36Q6PDM4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.72■□□□□ 0.59
Ccdc36Q6PDM4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc36Q6PDM4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc36Q6PDM4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc36Q6PDM4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc36Q6PDM4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc36Q6PDM4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ccdc36Q6PDM4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc36Q6PDM4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Ccdc36Q6PDM4 Gm6821-201ENSMUST00000107540 542 ntBASIC18.7■□□□□ 0.58
Ccdc36Q6PDM4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc36Q6PDM4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc36Q6PDM4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc36Q6PDM4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc36Q6PDM4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc36Q6PDM4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc36Q6PDM4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Ccdc36Q6PDM4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc36Q6PDM4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc36Q6PDM4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc36Q6PDM4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc36Q6PDM4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ccdc36Q6PDM4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc36Q6PDM4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc36Q6PDM4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ccdc36Q6PDM4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc36Q6PDM4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc36Q6PDM4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc36Q6PDM4 Gm30023-201ENSMUST00000197970 889 ntBASIC18.67■□□□□ 0.58
Ccdc36Q6PDM4 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.67■□□□□ 0.58
Ccdc36Q6PDM4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc36Q6PDM4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc36Q6PDM4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc36Q6PDM4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc36Q6PDM4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccdc36Q6PDM4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc36Q6PDM4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc36Q6PDM4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc36Q6PDM4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc36Q6PDM4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
Ccdc36Q6PDM4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc36Q6PDM4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ccdc36Q6PDM4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc36Q6PDM4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc36Q6PDM4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc36Q6PDM4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc36Q6PDM4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc36Q6PDM4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc36Q6PDM4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ccdc36Q6PDM4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc36Q6PDM4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc36Q6PDM4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc36Q6PDM4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc36Q6PDM4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc36Q6PDM4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc36Q6PDM4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc36Q6PDM4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc36Q6PDM4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc36Q6PDM4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc36Q6PDM4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc36Q6PDM4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc36Q6PDM4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc36Q6PDM4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.61■□□□□ 0.57
Ccdc36Q6PDM4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc36Q6PDM4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc36Q6PDM4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc36Q6PDM4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc36Q6PDM4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc36Q6PDM4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc36Q6PDM4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc36Q6PDM4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc36Q6PDM4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ccdc36Q6PDM4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc36Q6PDM4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc36Q6PDM4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc36Q6PDM4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc36Q6PDM4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc36Q6PDM4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc36Q6PDM4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc36Q6PDM4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc36Q6PDM4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc36Q6PDM4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc36Q6PDM4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc36Q6PDM4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
Ccdc36Q6PDM4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc36Q6PDM4 Gm8503-201ENSMUST00000118131 455 ntBASIC18.58■□□□□ 0.56
Ccdc36Q6PDM4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc36Q6PDM4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc36Q6PDM4 Notumos-201ENSMUST00000151998 2659 ntBASIC18.58■□□□□ 0.56
Ccdc36Q6PDM4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc36Q6PDM4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc36Q6PDM4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms