Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Smarcd3Q6P9Z1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcd3Q6P9Z1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcd3Q6P9Z1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.16■□□□□ 0.82
Smarcd3Q6P9Z1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd3Q6P9Z1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd3Q6P9Z1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.15■□□□□ 0.82
Smarcd3Q6P9Z1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd3Q6P9Z1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd3Q6P9Z1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Smarcd3Q6P9Z1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smarcd3Q6P9Z1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Smarcd3Q6P9Z1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smarcd3Q6P9Z1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Smarcd3Q6P9Z1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcd3Q6P9Z1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcd3Q6P9Z1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcd3Q6P9Z1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.14■□□□□ 0.81
Smarcd3Q6P9Z1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.14■□□□□ 0.81
Smarcd3Q6P9Z1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Smarcd3Q6P9Z1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Smarcd3Q6P9Z1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Smarcd3Q6P9Z1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Smarcd3Q6P9Z1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcd3Q6P9Z1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.13■□□□□ 0.81
Smarcd3Q6P9Z1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcd3Q6P9Z1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcd3Q6P9Z1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.13■□□□□ 0.81
Smarcd3Q6P9Z1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcd3Q6P9Z1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcd3Q6P9Z1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Smarcd3Q6P9Z1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd3Q6P9Z1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd3Q6P9Z1 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.12■□□□□ 0.81
Smarcd3Q6P9Z1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.12■□□□□ 0.81
Smarcd3Q6P9Z1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Smarcd3Q6P9Z1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd3Q6P9Z1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd3Q6P9Z1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd3Q6P9Z1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Smarcd3Q6P9Z1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.11■□□□□ 0.81
Smarcd3Q6P9Z1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smarcd3Q6P9Z1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd3Q6P9Z1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.1■□□□□ 0.81
Smarcd3Q6P9Z1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Smarcd3Q6P9Z1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcd3Q6P9Z1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcd3Q6P9Z1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcd3Q6P9Z1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcd3Q6P9Z1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcd3Q6P9Z1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcd3Q6P9Z1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcd3Q6P9Z1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcd3Q6P9Z1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd3Q6P9Z1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Smarcd3Q6P9Z1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Smarcd3Q6P9Z1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Smarcd3Q6P9Z1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.08■□□□□ 0.81
Smarcd3Q6P9Z1 Gm9812-201ENSMUST00000061934 968 ntBASIC20.08■□□□□ 0.81
Smarcd3Q6P9Z1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Smarcd3Q6P9Z1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcd3Q6P9Z1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Smarcd3Q6P9Z1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd3Q6P9Z1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd3Q6P9Z1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd3Q6P9Z1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd3Q6P9Z1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd3Q6P9Z1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd3Q6P9Z1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd3Q6P9Z1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.04■□□□□ 0.8
Smarcd3Q6P9Z1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smarcd3Q6P9Z1 Mir3960-201ENSMUST00000198213 73 ntBASIC20.04■□□□□ 0.8
Smarcd3Q6P9Z1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.04■□□□□ 0.8
Smarcd3Q6P9Z1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd3Q6P9Z1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smarcd3Q6P9Z1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.04■□□□□ 0.8
Smarcd3Q6P9Z1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.03■□□□□ 0.8
Smarcd3Q6P9Z1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.03■□□□□ 0.8
Smarcd3Q6P9Z1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd3Q6P9Z1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms