Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ParpbpQ6IRT3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.61■□□□□ 0.89
ParpbpQ6IRT3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ParpbpQ6IRT3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ParpbpQ6IRT3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ParpbpQ6IRT3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.6■□□□□ 0.89
ParpbpQ6IRT3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ParpbpQ6IRT3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ParpbpQ6IRT3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ParpbpQ6IRT3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ParpbpQ6IRT3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ParpbpQ6IRT3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ParpbpQ6IRT3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ParpbpQ6IRT3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.59■□□□□ 0.89
ParpbpQ6IRT3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ParpbpQ6IRT3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ParpbpQ6IRT3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ParpbpQ6IRT3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ParpbpQ6IRT3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ParpbpQ6IRT3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.58■□□□□ 0.89
ParpbpQ6IRT3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.58■□□□□ 0.89
ParpbpQ6IRT3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ParpbpQ6IRT3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.58■□□□□ 0.89
ParpbpQ6IRT3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ParpbpQ6IRT3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.57■□□□□ 0.88
ParpbpQ6IRT3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ParpbpQ6IRT3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ParpbpQ6IRT3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.56■□□□□ 0.88
ParpbpQ6IRT3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ParpbpQ6IRT3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.56■□□□□ 0.88
ParpbpQ6IRT3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ParpbpQ6IRT3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
ParpbpQ6IRT3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ParpbpQ6IRT3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ParpbpQ6IRT3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.55■□□□□ 0.88
ParpbpQ6IRT3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
ParpbpQ6IRT3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ParpbpQ6IRT3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ParpbpQ6IRT3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ParpbpQ6IRT3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ParpbpQ6IRT3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ParpbpQ6IRT3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ParpbpQ6IRT3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ParpbpQ6IRT3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.54■□□□□ 0.88
ParpbpQ6IRT3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ParpbpQ6IRT3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ParpbpQ6IRT3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ParpbpQ6IRT3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ParpbpQ6IRT3 Gm27502-201ENSMUST00000183495 199 ntBASIC20.54■□□□□ 0.88
ParpbpQ6IRT3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ParpbpQ6IRT3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ParpbpQ6IRT3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.53■□□□□ 0.88
ParpbpQ6IRT3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.53■□□□□ 0.88
ParpbpQ6IRT3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ParpbpQ6IRT3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ParpbpQ6IRT3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.52■□□□□ 0.88
ParpbpQ6IRT3 Gm44428-201ENSMUST00000204474 874 ntBASIC20.52■□□□□ 0.88
ParpbpQ6IRT3 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.52■□□□□ 0.88
ParpbpQ6IRT3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ParpbpQ6IRT3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ParpbpQ6IRT3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ParpbpQ6IRT3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.5■□□□□ 0.87
ParpbpQ6IRT3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ParpbpQ6IRT3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
ParpbpQ6IRT3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ParpbpQ6IRT3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ParpbpQ6IRT3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ParpbpQ6IRT3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ParpbpQ6IRT3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ParpbpQ6IRT3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ParpbpQ6IRT3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ParpbpQ6IRT3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ParpbpQ6IRT3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ParpbpQ6IRT3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ParpbpQ6IRT3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ParpbpQ6IRT3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ParpbpQ6IRT3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ParpbpQ6IRT3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
ParpbpQ6IRT3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ParpbpQ6IRT3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ParpbpQ6IRT3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ParpbpQ6IRT3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ParpbpQ6IRT3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ParpbpQ6IRT3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ParpbpQ6IRT3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ParpbpQ6IRT3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ParpbpQ6IRT3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ParpbpQ6IRT3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ParpbpQ6IRT3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ParpbpQ6IRT3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ParpbpQ6IRT3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ParpbpQ6IRT3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.46■□□□□ 0.87
ParpbpQ6IRT3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
ParpbpQ6IRT3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.45■□□□□ 0.86
ParpbpQ6IRT3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ParpbpQ6IRT3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ParpbpQ6IRT3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ParpbpQ6IRT3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ParpbpQ6IRT3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ParpbpQ6IRT3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms